| Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study TM Walker, CLC Ip, RH Harrell, JT Evans, G Kapatai, MJ Dedicoat, ... The Lancet Infectious Diseases, 2012 | 878 | 2012 |
| Transforming clinical microbiology with bacterial genome sequencing X Didelot, R Bowden, DJ Wilson, TEA Peto, DW Crook Nature Reviews Genetics 13 (9), 601-612, 2012 | 788 | 2012 |
| Diverse sources of C. difficile infection identified on whole-genome sequencing DW Eyre, ML Cule, DJ Wilson, D Griffiths, A Vaughan, L O'Connor, CLC Ip, ... N Engl J Med 369, 1195-1205, 2013 | 678 | 2013 |
| ClonalFrameML: efficient inference of recombination in whole bacterial genomes X Didelot, DJ Wilson PLoS computational biology 11 (2), e1004041, 2015 | 676 | 2015 |
| Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study TM Walker, TA Kohl, SV Omar, J Hedge, CDO Elias, P Bradley, Z Iqbal, ... The Lancet infectious diseases 15 (10), 1193-1202, 2015 | 574 | 2015 |
| Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis P Bradley, NC Gordon, TM Walker, L Dunn, S Heys, B Huang, S Earle, ... Nature communications 6 (1), 10063, 2015 | 543 | 2015 |
| Tracing the source of campylobacteriosis DJ Wilson, E Gabriel, AJH Leatherbarrow, J Cheesbrough, S Gee, ... PLoS genetics 4 (9), e1000203, 2008 | 510 | 2008 |
| Campylobacter Genotyping to Determine the Source of Human Infection SK Sheppard, JF Dallas, NJC Strachan, M MacRae, ND McCarthy, ... Clinical Infectious Diseases 48 (8), 1072-1078, 2009 | 471 | 2009 |
| Within-host evolution of bacterial pathogens X Didelot, AS Walker, TE Peto, DW Crook, DJ Wilson Nature Reviews Microbiology 14 (3), 150-162, 2016 | 392 | 2016 |
| Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing NC Gordon, JR Price, K Cole, R Everitt, M Morgan, J Finney, AM Kearns, ... Journal of clinical microbiology 52 (4), 1182-1191, 2014 | 346 | 2014 |
| Distribution of Serogroups and Genotypes among Disease-Associated and Carried Isolates of Neisseria meningitidis from the Czech Republic, Greece, and Norway SP Yazdankhah, P Kriz, G Tzanakaki, J Kremastinou, J Kalmusova, ... Journal of clinical microbiology 42 (11), 5146-5153, 2004 | 296 | 2004 |
| Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease BC Young, T Golubchik, EM Batty, R Fung, H Larner-Svensson, ... Proceedings of the National Academy of Sciences 109 (12), 4550-4555, 2012 | 292 | 2012 |
| Effects of control interventions on Clostridium difficile infection in England: an observational study KE Dingle, X Didelot, TP Quan, DW Eyre, N Stoesser, T Golubchik, ... The Lancet Infectious Diseases 17 (4), 411-421, 2017 | 288 | 2017 |
| A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance DW Eyre, T Golubchik, NC Gordon, R Bowden, P Piazza, EM Batty, ... BMJ open 2 (3), e001124, 2012 | 280 | 2012 |
| Prediction of susceptibility to first-line tuberculosis drugs by DNA sequencing CRyPTIC Consortium and the 100,000 Genomes Project New England Journal of Medicine 379 (15), 1403-1415, 2018 | 276 | 2018 |
| Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131 N Stoesser, AE Sheppard, L Pankhurst, N De Maio, CE Moore, R Sebra, ... MBio 7 (2), e02162-15, 2016 | 275* | 2016 |
| Estimating diversifying selection and functional constraint in the presence of recombination DJ Wilson, G McVean Genetics 172 (3), 1411-1425, 2006 | 272 | 2006 |
| Genetic analysis of meningococci carried by children and young adults H Claus, MCJ Maiden, DJ Wilson, ND McCarthy, KA Jolley, R Urwin, ... The Journal of infectious diseases 191 (8), 1263-1271, 2005 | 267 | 2005 |
| Nested Russian Doll-Like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance Gene blaKPC AE Sheppard, N Stoesser, DJ Wilson, R Sebra, A Kasarskis, LW Anson, ... Antimicrobial agents and chemotherapy 60 (6), 3767-3778, 2016 | 248 | 2016 |
| Identifying lineage effects when controlling for population structure improves power in bacterial association studies. SG Earle, CH Wu, J Charlesworth, N Stoesser, NC Gordon, TM Walker, ... Nature Microbiology 1, 16041, 2016 | 242 | 2016 |
Sarah WalkerProfessor of Medical Statistics and Epidemiology, Oxford University and University College LondonVerified email at ndm.ox.ac.uk
