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Jason Inman
Jason Inman
Bioinformatics Scientist, NIH/NCATS
Verified email at nih.gov
Title
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Cited by
Year
A mammalian microRNA expression atlas based on small RNA library sequencing
P Landgraf, M Rusu, R Sheridan, A Sewer, N Iovino, A Aravin, S Pfeffer, ...
Cell 129 (7), 1401-1414, 2007
44622007
Genomic Islands in the Pathogenic Filamentous Fungus Aspergillus fumigatus
ND Fedorova, N Khaldi, VS Joardar, R Maiti, P Amedeo, MJ Anderson, ...
PLoS genetics 4 (4), e1000046, 2008
5772008
PanOCT: automated clustering of orthologs using conserved gene neighborhood for pan-genomic analysis of bacterial strains and closely related species
DE Fouts, L Brinkac, E Beck, J Inman, G Sutton
Nucleic acids research 40 (22), e172-e172, 2012
2262012
Host genetic control of the oral microbiome in health and disease
A Gomez, JL Espinoza, DM Harkins, P Leong, R Saffery, M Bockmann, ...
Cell host & microbe 22 (3), 269-278. e3, 2017
2032017
A new strategy to amplify degraded RNA from small tissue samples for microarray studies
CC Xiang, M Chen, L Ma, QN Phan, JM Inman, OA Kozhich, ...
Nucleic acids research 31 (9), e53-e53, 2003
1202003
Ergatis: a web interface and scalable software system for bioinformatics workflows
J Orvis, J Crabtree, K Galens, A Gussman, JM Inman, E Lee, S Nampally, ...
Bioinformatics 26 (12), 1488-1492, 2010
1192010
Comparative genome analysis of 19 Ureaplasma urealyticum and Ureaplasma parvumstrains
V Paralanov, J Lu, LB Duffy, DM Crabb, S Shrivastava, BA Methé, J Inman, ...
BMC microbiology 12, 1-20, 2012
1092012
Amine-modified random primers to label probes for DNA microarrays
CC Xiang, OA Kozhich, M Chen, JM Inman, QN Phan, Y Chen, ...
Nature biotechnology 20 (7), 738-742, 2002
982002
Supragingival plaque microbiome ecology and functional potential in the context of health and disease
JL Espinoza, DM Harkins, M Torralba, A Gomez, SK Highlander, ...
MBio 9 (6), 10.1128/mbio. 01631-18, 2018
702018
The Viral MetaGenome Annotation Pipeline (VMGAP): an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data
HA Lorenzi, J Hoover, J Inman, T Safford, S Murphy, L Kagan, ...
Standards in genomic sciences 4, 418-429, 2011
652011
The Viral MetaGenome Annotation Pipeline (VMGAP): an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data
HA Lorenzi, J Hoover, J Inman, T Safford, S Murphy, L Kagan, ...
Standards in genomic sciences 4, 418-429, 2011
652011
Gene expression profiling of human placentas from preeclamptic and normotensive pregnancies
SR Hansson, Y Chen, J Brodszki, M Chen, E Hernandez-Andrade, ...
Molecular human reproduction 12 (3), 169-179, 2006
652006
Genetic and phenotypic diversity in Burkholderia: contributions by prophage and phage-like elements
CM Ronning, L Losada, L Brinkac, J Inman, RL Ulrich, M Schell, ...
BMC microbiology 10, 1-17, 2010
612010
Probe generation directly from small numbers of cells for DNA microarray studies
CC Xiang, M Chen, OA Kozhich, QN Phan, JM Inman, Y Chen, ...
Biotechniques 34 (2), 386-393, 2003
332003
Pathema: a clade-specific bioinformatics resource center for pathogen research
LM Brinkac, T Davidsen, E Beck, A Ganapathy, E Caler, RJ Dodson, ...
Nucleic acids research 38 (suppl_1), D408-D414, 2010
222010
Sensitive and specific method for detecting G protein–coupled receptor mRNAs
A Hansen, Y Chen, JM Inman, QN Phan, ZQ Qi, CC Xiang, M Palkovits, ...
Nature methods 4 (1), 35-37, 2007
192007
PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes
TH Clarke, LM Brinkac, JM Inman, G Sutton, DE Fouts
BMC bioinformatics 19, 1-6, 2018
182018
Large-scale comparative analysis of microbial pan-genomes using PanOCT
JM Inman, GG Sutton, E Beck, LM Brinkac, TH Clarke, DE Fouts
Bioinformatics 35 (6), 1049-1050, 2019
162019
LOCUST: a custom sequence locus typer for classifying microbial isolates
LM Brinkac, E Beck, J Inman, P Venepally, DE Fouts, G Sutton
Bioinformatics 33 (11), 1725-1726, 2017
152017
Scalable generation of sensory neurons from human pluripotent stem cells
T Deng, VM Jovanovic, CA Tristan, C Weber, PH Chu, J Inman, S Ryu, ...
Stem Cell Reports 18 (4), 1030-1047, 2023
112023
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