Daan R. Speth
Daan R. Speth
Postdoc, Orphan Lab, Caltech
Bekræftet mail på caltech.edu
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Complete nitrification by a single microorganism
MAHJ van Kessel, DR Speth, M Albertsen, PH Nielsen, HJMO den Camp, ...
Nature 528 (7583), 555-559, 2015
5112015
A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ...
Nature communications 5, 4498, 2014
3232014
Archaea catalyze iron-dependent anaerobic oxidation of methane
KF Ettwig, B Zhu, D Speth, JT Keltjens, MSM Jetten, B Kartal
Proceedings of the National Academy of Sciences 113 (45), 12792-12796, 2016
1972016
The metagenome of the marine anammox bacterium ‘Candidatus Scalindua profunda’illustrates the versatility of this globally important nitrogen cycle bacterium
J van de Vossenberg, D Woebken, WJ Maalcke, HJCT Wessels, BE Dutilh, ...
Environmental microbiology 15 (5), 1275-1289, 2013
1872013
Genome-based microbial ecology of anammox granules in a full-scale wastewater treatment system
DR Speth, MH In't Zandt, S Guerrero-Cruz, BE Dutilh, MSM Jetten
Nature communications 7, 2016
1382016
Bacterial oxygen production in the dark
KF Ettwig, DR Speth, J Reimann, ML Wu, MSM Jetten, JT Keltjens
Frontiers in Microbiology 3, 2012
822012
A metagenomics-based metabolic model of nitrate-dependent anaerobic oxidation of methane by Methanoperedens-like archaea
A Arshad, DR Speth, RM de Graaf, HJM Op den Camp, MSM Jetten, ...
Frontiers in microbiology 6, 1423, 2015
772015
Metagenome analysis of a complex community reveals the metabolic blueprint of anammox bacterium “Candidatus Jettenia asiatica”
Z Hu, DR Speth, KJ Francoijs, ZX Quan, M Jetten
Frontiers in microbiology 3, 366, 2012
742012
Whole-Genome Microarray and Gene Deletion Studies Reveal Regulation of the Polyhydroxyalkanoate Production Cycle by the Stringent Response in Ralstonia eutropha H16
CJ Brigham, DR Speth, CK Rha, AJ Sinskey
Applied and environmental microbiology 78 (22), 8033-8044, 2012
602012
Genomic analysis indicates the presence of an asymmetric bilayer outer membrane in Planctomycetes and Verrucomicrobia
DR Speth, M van Teeseling, M Jetten
Frontiers in microbiology 3, 304, 2012
532012
Interactions between anaerobic ammonium and sulfur‐oxidizing bacteria in a laboratory scale model system
L Russ, DR Speth, MSM Jetten, HJM Op den Camp, B Kartal
Environmental microbiology 16 (11), 3487-3498, 2014
492014
Metagenomic analysis of nitrogen and methane cycling in the Arabian Sea oxygen minimum zone
C Lüke, DR Speth, MAR Kox, L Villanueva, MSM Jetten
PeerJ 4, e1924, 2016
482016
Draft genome of scalindua rubra, obtained from the interface above the discovery deep brine in the red sea, sheds light on potential salt adaptation strategies in anammox bacteria
DR Speth, I Lagkouvardos, Y Wang, PY Qian, BE Dutilh, MSM Jetten
Microbial ecology 74 (1), 1-5, 2017
312017
Comparative genomics of two independently enriched “Candidatus Kuenenia stuttgartiensis” anammox bacteria
DR Speth, B Hu, N Bosch, J Keltjens, H Stunnenberg, M Jetten
Frontiers in microbiology 3, 307, 2012
312012
A New Addition to the Cell Plan of Anammox Bacteria:“Candidatus Kuenenia stuttgartiensis” Has a Protein Surface Layer as the Outermost Layer of the Cell
MCF van Teeseling, NM de Almeida, A Klingl, DR Speth, ...
Journal of bacteriology 196 (1), 80-89, 2014
302014
Draft genome sequence of anammox bacterium “Candidatus Scalindua brodae,” obtained using differential coverage binning of sequencing data from two reactor enrichments
DR Speth, L Russ, B Kartal, HJM Op den Camp, BE Dutilh, MSM Jetten
Genome Announc. 3 (1), e01415-14, 2015
272015
Shotgun metagenomic data reveals significant abundance but low diversity of “Candidatus Scalindua” marine anammox bacteria in the Arabian Sea oxygen minimum zone
L Villanueva, DR Speth, T van Alen, A Hoischen, MSM Jetten
Frontiers in microbiology 5, 2014
272014
Genome Characteristics of Two Novel Type I Methanotrophs Enriched from North Sea Sediments Containing Exclusively a Lanthanide-Dependent XoxF5-Type Methanol Dehydrogenase
B Vekeman, D Speth, J Wille, G Cremers, P De Vos, HJMO den Camp, ...
Microbial Ecology 72 (3), 503-509, 2016
212016
Identification of the type II cytochrome c maturation pathway in anammox bacteria by comparative genomics
C Ferousi, DR Speth, J Reimann, HJMO den Camp, JWA Allen, ...
BMC microbiology 13 (1), 265, 2013
172013
A novel marine nitrite-oxidizing Nitrospira species from Dutch coastal North Sea water
SCM Haaijer, K Ji, L Van Niftrik, A Hoischen, DR Speth, MSM Jetten, ...
Frontiers in microbiology 4, 60, 2013
162013
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Artikler 1–20