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Derek M. Harkins
Derek M. Harkins
Associate Lead Scientist, Bioinformatics, Booz|Allen|Hamilton
Verified email at bah.com
Title
Cited by
Cited by
Year
TIGRFAMs and genome properties in 2013
DH Haft, JD Selengut, RA Richter, D Harkins, MK Basu, E Beck
Nucleic acids research 41 (D1), D387-D395, 2012
5762012
Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7
PH Roy, SG Tetu, A Larouche, L Elbourne, S Tremblay, Q Ren, R Dodson, ...
PloS one 5 (1), e8842, 2010
3062010
Host genetic control of the oral microbiome in health and disease
A Gomez, JL Espinoza, DM Harkins, P Leong, R Saffery, M Bockmann, ...
Cell host & microbe 22 (3), 269-278. e3, 2017
2022017
New insights into dissemination and variation of the health care-associated pathogen Acinetobacter baumannii from genomic analysis
MS Wright, DH Haft, DM Harkins, F Perez, KM Hujer, S Bajaksouzian, ...
MBio 5 (1), 10.1128/mbio. 00963-13, 2014
1752014
Insights into the Environmental Resistance Gene Pool from the Genome Sequence of the Multidrug-Resistant Environmental Isolate Escherichia coli SMS-3-5
WF Fricke, MS Wright, AH Lindell, DM Harkins, C Baker-Austin, J Ravel, ...
Journal of bacteriology 190 (20), 6779-6794, 2008
1262008
Gastrointestinal microbial populations can distinguish pediatric and adolescent Acute Lymphoblastic Leukemia (ALL) at the time of disease diagnosis
SV Rajagopala, S Yooseph, DM Harkins, KJ Moncera, KB Zabokrtsky, ...
BMC genomics 17, 1-10, 2016
1212016
Stool microbiota composition is associated with the prospective risk of Plasmodium falciparum infection
S Yooseph, EF Kirkness, TM Tran, DM Harkins, MB Jones, MG Torralba, ...
BMC genomics 16, 1-15, 2015
1182015
A novel method of consensus pan-chromosome assembly and large-scale comparative analysis reveal the highly flexible pan-genome of Acinetobacter baumannii
AP Chan, G Sutton, J DePew, R Krishnakumar, Y Choi, XZ Huang, E Beck, ...
Genome biology 16, 1-28, 2015
1162015
Whole Genome Analysis of Leptospira licerasiae Provides Insight into Leptospiral Evolution and Pathogenicity
JN Ricaldi, DE Fouts, JD Selengut, DM Harkins, KP Patra, A Moreno, ...
PLoS neglected tropical diseases 6 (10), e1853, 2012
982012
Advances in microbiome research for animal health
RS Peixoto, DM Harkins, KE Nelson
Annual Review of Animal Biosciences 9, 289-311, 2021
802021
Draft Genome Sequence of Turicibacter sanguinis PC909, Isolated from Human Feces
PO Cuív, ES Klaassens, AS Durkin, DM Harkins, L Foster, J McCorrison, ...
Journal of bacteriology 193 (5), 1288-1289, 2011
692011
Supragingival plaque microbiome ecology and functional potential in the context of health and disease
JL Espinoza, DM Harkins, M Torralba, A Gomez, SK Highlander, ...
MBio 9 (6), 10.1128/mbio. 01631-18, 2018
672018
Application of RT-PCR for indexing avocado sunblotch viroid
RJ Schnell, DN Kuhn, CM Ronning, D Harkins
Plant Disease 81 (9), 1023-1026, 1997
641997
Pathogenomic Inference of Virulence-Associated Genes in Leptospira interrogans
JS Lehmann, DE Fouts, DH Haft, AP Cannella, JN Ricaldi, L Brinkac, ...
PLoS neglected tropical diseases 7 (10), e2468, 2013
622013
Analysis of the Aedes albopictus C6/36 genome provides insight into cell line utility for viral propagation
JR Miller, S Koren, KA Dilley, V Puri, DM Brown, DM Harkins, ...
Gigascience 7 (3), gix135, 2018
582018
A draft genome sequence for the Ixodes scapularis cell line, ISE6
JR Miller, S Koren, KA Dilley, DM Harkins, TB Stockwell, RS Shabman, ...
F1000Research 7, 2018
572018
Longitudinal study of oral microbiome variation in twins
M Freire, A Moustafa, DM Harkins, MG Torralba, Y Zhang, P Leong, ...
Scientific reports 10 (1), 7954, 2020
442020
Xylitol and sorbitol effects on the microbiome of saliva and plaque
R Rafeek, CVF Carrington, A Gomez, D Harkins, M Torralba, C Kuelbs, ...
Journal of oral microbiology 11 (1), 1536181, 2019
442019
Saturation mapping of a major gene for resistance to white pine blister rust in sugar pine
DM Harkins, GN Johnson, PA Skaggs, AD Mix, GE Dupper, ME Devey, ...
Theoretical and applied genetics 97, 1355-1360, 1998
391998
CharProtDB: a database of experimentally characterized protein annotations
R Madupu, A Richter, RJ Dodson, L Brinkac, D Harkins, S Durkin, ...
Nucleic acids research 40 (D1), D237-D241, 2012
312012
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