Wei Li
Wei Li
Professor of Bioinformatics, University of California Irvine; Baylor College of Medicine
Verified email at uci.edu - Homepage
Title
Cited by
Cited by
Year
Model-based analysis of ChIP-Seq (MACS)
Y Zhang, T Liu, CA Meyer, J Eeckhoute, DS Johnson, BE Bernstein, ...
Genome biol 9 (9), R137, 2008
96922008
The cancer genome atlas pan-cancer analysis project
JN Weinstein, EA Collisson, GB Mills, KRM Shaw, BA Ozenberger, ...
Nature genetics 45 (10), 1113-1120, 2013
4169*2013
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
41182015
A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
J Yu, S Hu, J Wang, GKS Wong, S Li, B Liu, Y Deng, L Dai, Y Zhou, ...
Science 296 (5565), 79, 2002
37492002
Genome-wide analysis of estrogen receptor binding sites
JS Carroll, CA Meyer, J Song, W Li, TR Geistlinger, J Eeckhoute, ...
Nature genetics 38 (11), 1289-1297, 2006
14732006
Chromosome-wide mapping of estrogen receptor binding reveals long-range regulation requiring the forkhead protein FoxA1
JS Carroll, XS Liu, AS Brodsky, W Li, CA Meyer, AJ Szary, J Eeckhoute, ...
Cell 122 (1), 33-43, 2005
13882005
RSeQC: Quality Control of RNA-seq experiments
L Wang, S Wang, W Li
Bioinformatics, 2012
12492012
Multiplatform Analysis of 12 Cancer Types Reveals Molecular Classification within and across Tissues of Origin
KA Hoadley, C Yau, DM Wolf, AD Cherniack, D Tamborero, S Ng, ...
Cell 158 (4), 929-944, 2014
11482014
CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model
L Wang, HJ Park, S Dasari, S Wang, JP Kocher, W Li
Nucleic Acids Research, 2013
10232013
Dnmt3a is essential for hematopoietic stem cell differentiation
GA Challen, D Sun, M Jeong, M Luo, J Jelinek, JS Berg, C Bock, ...
Nature Genetics 44 (1), 23-31, 2011
9612011
FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription
M Lupien, J Eeckhoute, CA Meyer, Q Wang, Y Zhang, W Li, JS Carroll, ...
Cell 132 (6), 958-970, 2008
9382008
Comprehensive and integrative genomic characterization of hepatocellular carcinoma
A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ...
Cell 169 (7), 1327-1341. e23, 2017
9202017
Androgen receptor regulates a distinct transcription program in androgen-independent prostate cancer
Q Wang, W Li, Y Zhang, X Yuan, K Xu, J Yu, Z Chen, R Beroukhim, ...
Cell 138 (2), 245-256, 2009
9022009
BSMAP: whole genome bisulfite sequence MAPping program
Y Xi, W Li
BMC bioinformatics 10 (1), 232, 2009
7762009
A hierarchical network of transcription factors governs androgen receptor-dependent prostate cancer growth
Q Wang, W Li, XS Liu, JS Carroll, OA Jšnne, EK Keeton, AM Chinnaiyan, ...
Molecular cell 27 (3), 380-392, 2007
6582007
Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
RA Harris, T Wang, C Coarfa, RP Nagarajan, C Hong, SL Downey, ...
Nature biotechnology 28 (10), 1097-1105, 2010
6492010
Model-based analysis of tiling-arrays for ChIP-chip
WE Johnson, W Li, CA Meyer, R Gottardo, JS Carroll, M Brown, XS Liu
Proceedings of the National Academy of Sciences 103 (33), 12457-12462, 2006
4992006
SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation
MF Barber, E Michishita-Kioi, Y Xi, L Tasselli, M Kioi, Z Moqtaderi, ...
Nature 487 (7405), 114-118, 2012
4622012
Epigenomic Profiling of Young and Aged HSCs Reveals Concerted Changes during Aging that Reinforce Self-Renewal
D Sun, M Luo, M Jeong, B Rodriguez, Z Xia, R Hannah, H Wang, T Le, ...
Cell Stem Cell 14 (5), 673-688, 2014
4242014
Analysis of the human endogenous coregulator complexome.
A Malovannaya, RB Lanz, SY Jung, Y Bulynko, NT Le, DW Chan, C Ding, ...
Cell 145 (5), 787, 2011
4122011
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