Fred P. Davis
Fred P. Davis
Celsius Therapeutics
Verified email at - Homepage
Cited by
Cited by
MODBASE: a database of annotated comparative protein structure models and associated resources
U Pieper, N Eswar, FP Davis, H Braberg, MS Madhusudhan, A Rossi, ...
Nucleic acids research 34 (suppl_1), D291-D295, 2006
Epigenomic signatures of neuronal diversity in the mammalian brain
A Mo, EA Mukamel, FP Davis, C Luo, GL Henry, S Picard, MA Urich, ...
Neuron 86 (6), 1369-1384, 2015
MODBASE, a database of annotated comparative protein structure models, and associated resources
U Pieper, N Eswar, H Braberg, MS Madhusudhan, FP Davis, AC Stuart, ...
Nucleic acids research 32 (suppl_1), D217-D222, 2004
ModBase, a database of annotated comparative protein structure models, and associated resources
U Pieper, BM Webb, DT Barkan, D Schneidman-Duhovny, A Schlessinger, ...
Nucleic acids research 39 (suppl_1), D465-D474, 2010
A structural perspective on protein–protein interactions
RB Russell, F Alber, P Aloy, FP Davis, D Korkin, M Pichaud, M Topf, A Sali
Current opinion in structural biology 14 (3), 313-324, 2004
PIBASE: a comprehensive database of structurally defined protein interfaces
FP Davis, A Sali
Bioinformatics 21 (9), 1901-1907, 2005
Developmental acquisition of regulomes underlies innate lymphoid cell functionality
HY Shih, G Sciumè, Y Mikami, L Guo, HW Sun, SR Brooks, JF Urban Jr, ...
Cell 165 (5), 1120-1133, 2016
Host–pathogen protein interactions predicted by comparative modeling
FP Davis, DT Barkan, N Eswar, JH McKerrow, A Sali
Protein Science 16 (12), 2585-2596, 2007
Cell type–specific genomics of Drosophila neurons
GL Henry, FP Davis, S Picard, SR Eddy
Nucleic acids research 40 (19), 9691-9704, 2012
NSF workshop report: discovering general principles of nervous system organization by comparing brain maps across species
GF Striedter, TG Belgard, CC Chen, FP Davis, BL Finlay, O Güntürkün, ...
Brain, behavior and evolution 83 (1), 1-8, 2014
Protein complex compositions predicted by structural similarity
FP Davis, H Braberg, MY Shen, U Pieper, A Sali, MS Madhusudhan
Nucleic acids research 34 (10), 2943-2952, 2006
Epigenomic landscapes of retinal rods and cones
A Mo, C Luo, FP Davis, EA Mukamel, GL Henry, JR Nery, MA Urich, ...
Elife 5, e11613, 2016
Localization of protein‐binding sites within families of proteins
D Korkin, FP Davis, A Sali
Protein Science 14 (9), 2350-2360, 2005
The optimal size of a globular protein domain: A simple sphere-packing model
M Shen, FP Davis, A Sali
Chemical Physics Letters 405 (1-3), 224-228, 2005
The overlap of small molecule and protein binding sites within families of protein structures
FP Davis, A Sali
PLoS computational biology 6 (2), 2010
Structural modeling of protein interactions by analogy: application to PSD-95
D Korkin, FP Davis, F Alber, T Luong, MY Shen, V Lucic, MB Kennedy, ...
PLoS computational biology 2 (11), 2006
BACH2 immunodeficiency illustrates an association between super-enhancers and haploinsufficiency
B Afzali, J Grönholm, J Vandrovcova, C O'Brien, HW Sun, I Vanderleyden, ...
Nature immunology 18 (7), 813, 2017
The AnnoLite and AnnoLyze programs for comparative annotation of protein structures
MA Marti-Renom, A Rossi, F Al-Shahrour, FP Davis, U Pieper, J Dopazo, ...
BMC bioinformatics 8 (S4), S4, 2007
Subset-and tissue-defined STAT5 thresholds control homeostasis and function of innate lymphoid cells
AV Villarino, G Sciumè, FP Davis, S Iwata, B Zitti, GW Robinson, ...
Journal of Experimental Medicine 214 (10), 2999-3014, 2017
DBAli tools: mining the protein structure space
MA Marti-Renom, U Pieper, MS Madhusudhan, A Rossi, N Eswar, ...
Nucleic acids research 35 (suppl_2), W393-W397, 2007
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