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Madeleine Ernst
Madeleine Ernst
Section for Clinical Mass Spectrometry, Danish Center for Neonatal Screening
Verified email at ssi.dk
Title
Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
173272019
Feature-based molecular networking in the GNPS analysis environment
LF Nothias, D Petras, R Schmid, K Dührkop, J Rainer, A Sarvepalli, ...
Nature Methods 17 (9), 905-908, 2020
10692020
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
10362018
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
AT Aron, EC Gentry, KL McPhail, LF Nothias, M Nothias-Esposito, ...
Nature protocols 15 (6), 1954-1991, 2020
5372020
MolNetEnhancer: Enhanced molecular networks by integrating metabolome mining and annotation tools
M Ernst, KB Kang, AM Caraballo-Rodríguez, LF Nothias, J Wandy, ...
Metabolites 9 (7), 144, 2019
3522019
Global medicinal uses of Euphorbia L. (Euphorbiaceae)
M Ernst, OM Grace, CH Saslis-Lagoudakis, N Nilsson, HT Simonsen, ...
Journal of ethnopharmacology 176, 90-101, 2015
2742015
Mass spectrometry in plant metabolomics strategies: from analytical platforms to data acquisition and processing
M Ernst, DB Silva, RR Silva, RZN Vêncio, NP Lopes
Natural product reports 31 (6), 784-806, 2014
2262014
Mass spectrometry searches using MASST
M Wang, AK Jarmusch, F Vargas, AA Aksenov, JM Gauglitz, K Weldon, ...
Nature biotechnology 38 (1), 23-26, 2020
2162020
Heavy metal exposure causes changes in the metabolic health-associated gut microbiome and metabolites
X Li, AD Brejnrod, M Ernst, M Rykær, J Herschend, NMC Olsen, ...
Environment international 126, 454-467, 2019
1722019
Auto-deconvolution and molecular networking of gas chromatography–mass spectrometry data
AA Aksenov, I Laponogov, Z Zhang, SLF Doran, I Belluomo, D Veselkov, ...
Nature biotechnology 39 (2), 169-173, 2021
1232021
Home chemical and microbial transitions across urbanization
LI Mccall, C Callewaert, Q Zhu, SJ Song, A Bouslimani, JJ Minich, M Ernst, ...
Nature Microbiology 5 (1), 108-115, 2020
1212020
Chemically informed analyses of metabolomics mass spectrometry data with Qemistree
A Tripathi, Y Vázquez-Baeza, JM Gauglitz, M Wang, K Dührkop, ...
Nature Chemical Biology 17 (2), 146-151, 2021
1002021
ReDU: a framework to find and reanalyze public mass spectrometry data
AK Jarmusch, M Wang, CM Aceves, RS Advani, S Aguirre, AA Aksenov, ...
Nature Methods 17 (9), 901-904, 2020
982020
Mass spectrometry of flavonoid vicenin-2, based sunlight barriers in Lychnophora species
DB Silva, ICC Turatti, DR Gouveia, M Ernst, SP Teixeira, NP Lopes
Scientific reports 4 (1), 1-8, 2014
942014
Identification of the bacterial biosynthetic gene clusters of the oral microbiome illuminates the unexplored social language of bacteria during health and disease
G Aleti, JL Baker, X Tang, R Alvarez, M Dinis, NC Tran, AV Melnik, ...
MBio 10 (2), e00321-19, 2019
912019
Evolutionary prediction of medicinal properties in the genus Euphorbia L.
M Ernst, CH Saslis-Lagoudakis, OM Grace, N Nilsson, HT Simonsen, ...
Scientific Reports 6 (1), 1-10, 2016
892016
Deciphering complex metabolite mixtures by unsupervised and supervised substructure discovery and semi-automated annotation from MS/MS spectra
S Rogers, CW Ong, J Wandy, M Ernst, L Ridder, JJJ Van Der Hooft
Faraday Discussions 218, 284-302, 2019
762019
A multi-omics approach unravels metagenomic and metabolic alterations of a probiotic and synbiotic additive in rainbow trout (Oncorhynchus mykiss)
JA Rasmussen, KR Villumsen, M Ernst, M Hansen, T Forberg, ...
Microbiome 10 (1), 1-19, 2022
73*2022
Comprehensive mass spectrometry‐guided phenotyping of plant specialized metabolites reveals metabolic diversity in the cosmopolitan plant family Rhamnaceae
KB Kang, M Ernst, JJJ Van Der Hooft, RR Da Silva, J Park, MH Medema, ...
The Plant Journal 98 (6), 1134-1144, 2019
732019
Functional Traits 2.0: The power of the metabolome for ecology
TWN Walker, JM Alexander, PM Allard, O Baines, V Baldy, RD Bardgett, ...
Journal of Ecology 110 (1), 4-20, 2022
702022
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