Beth Shapiro

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Richard E. GreenProf of Biomolecular Engineering, UCSC, UC Santa Cruz Genomics InstituteVerified email at soe.ucsc.edu
Peter D. HeintzmanCentre for Palaeogenetics, Stockholm UniversityVerified email at geo.su.se
Simon HoProfessor of Molecular Evolution, University of SydneyVerified email at sydney.edu.au
M Thomas P GilbertUniversity of CopenhagenVerified email at sund.ku.dk
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
James A. CahillLecturer and PI, University of FloridaVerified email at ufl.edu
Philippe LemeyFull Professor, KU LeuvenVerified email at kuleuven.be
Ludovic OrlandoCentre for Anthropobiology & Genomics of Toulouse, CNRS/Univ Paul SabatierVerified email at univ-tlse3.fr
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Michael HofreiterProfessor for Evolutionary Adaptive Genomics, University of PotsdamVerified email at uni-potsdam.de
Tara FultonEnvironment and Climate Change CanadaVerified email at ualberta.ca
Ian BarnesProfessor of Molecular Palaeobiology, Natural History MuseumVerified email at nhm.ac.uk
Mathias StillerInstitute of Pathology, University Leipzig, GermanyVerified email at medizin.uni-leipzig.de
André Elias Rodrigues SoaresNational Bioinformatics Infrastructure of Sweden (NBIS), SciLifeLab, Uppsala University, SwedenVerified email at ebc.uu.se
Michael BunceMAB research consulting, Professor at Curtin & Otago UniversitiesVerified email at curtin.edu.au
Love DalénProfessor, Stockholm UniversityVerified email at zoologi.su.se
Duane FroeseProfessor Earth and Atmospheric Sciences, University of AlbertaVerified email at ualberta.ca
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu

Beth Shapiro

UC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa Cruz

Verified email at ucsc.edu

ancient DNA genomics molecular ecology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular biology and evolution 22 (5), 1185-1192, 2005	3443	2005
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014	1969	2014
Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021	1841	2021
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013	1005	2013
Diverse plant and animal genetic records from Holocene and Pleistocene sediments E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ... Science 300 (5620), 791-795, 2003	843	2003
Rise and fall of the Beringian steppe bison B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ... Science 306 (5701), 1561-1565, 2004	799	2004
Species-specific responses of Late Quaternary megafauna to climate and humans ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ... Nature 479 (7373), 359-364, 2011	793	2011
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences B Shapiro, A Rambaut, AJ Drummond Molecular biology and evolution 23 (1), 7-9, 2006	791	2006
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ... science 311 (5759), 392-394, 2006	775	2006
Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ... Science 342 (6160), 871-874, 2013	724	2013
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular biology and evolution 30 (3), 713-724, 2013	537	2013
Skyline‐plot methods for estimating demographic history from nucleotide sequences SYW Ho, B Shapiro Molecular ecology resources 11 (3), 423-434, 2011	532	2011
Dynamics of Pleistocene population extinctions in Beringian brown bears I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper Science 295 (5563), 2267-2270, 2002	434	2002
The earliest evidence for anatomically modern humans in northwestern Europe T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ... Nature 479 (7374), 521-524, 2011	388	2011
Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs CJ Edwards, R Bollongino, A Scheu, A Chamberlain, A Tresset, JD Vigne, ... Proceedings of the Royal Society B: Biological Sciences 274 (1616), 1377-1385, 2007	360	2007
Prehistoric genomes reveal the genetic foundation and cost of horse domestication M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ... Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014	348	2014
Dense sampling of bird diversity increases power of comparative genomics S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ... Nature 587 (7833), 252-257, 2020	340	2020
Conservation of biodiversity in the genomics era MA Supple, B Shapiro Genome biology 19, 1-12, 2018	331	2018
Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses C Firth, A Kitchen, B Shapiro, MA Suchard, EC Holmes, A Rambaut Molecular biology and evolution 27 (9), 2038-2051, 2010	329	2010
Evidence for time dependency of molecular rate estimates SYW Ho, B Shapiro, MJ Phillips, A Cooper, AJ Drummond Systematic biology 56 (3), 515-522, 2007	313	2007

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