Beth Shapiro

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Richard E. GreenProf of Biomolecular Engineering, UCSC, UC Santa Cruz Genomics InstituteVerified email at soe.ucsc.edu
Simon HoProfessor of Molecular Evolution, University of SydneyVerified email at sydney.edu.au
M Thomas P GilbertUniversity of CopenhagenVerified email at sund.ku.dk
Eske WillerslevCentre for GeoGenetics, University of CopenhagenVerified email at snm.ku.dk
Peter D. HeintzmanCentre for Palaeogenetics, Stockholm UniversityVerified email at geo.su.se
Alexei J. DrummondProfessor of Computational Biology, University of AucklandVerified email at cs.auckland.ac.nz
James A. CahillLecturer and PI, University of FloridaVerified email at ufl.edu
Michael HofreiterProfessor for Evolutionary Adaptive Genomics, University of PotsdamVerified email at uni-potsdam.de
Philippe LemeyAssociate Professor, KU LeuvenVerified email at kuleuven.be
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Tara FultonEnvironment and Climate Change CanadaVerified email at ualberta.ca
Ian BarnesProfessor of Molecular Palaeobiology, Natural History MuseumVerified email at nhm.ac.uk
Mathias StillerInstitute of Pathology, University Leipzig, GermanyVerified email at medizin.uni-leipzig.de
Ludovic OrlandoCentre for Anthropobiology & Genomics of Toulouse, CNRS/Univ Paul SabatierVerified email at univ-tlse3.fr
André Elias Rodrigues SoaresNational Bioinformatics Infrastructure of Sweden (NBIS), SciLifeLab, Uppsala University, SwedenVerified email at ebc.uu.se
Michael BunceChief Science Advisor (DOC), Adjunct/Honorary Professor at Curtin and Otago UniversitiesVerified email at curtin.edu.au
Ross MacPheeCurator of Mammals, American Museum of Natural HistoryVerified email at amnh.org
Marc A. SuchardProfessor, University of California, Los AngelesVerified email at ucla.edu
Ross BarnettCopenhagen UniversityVerified email at snm.ku.dk

Beth Shapiro

UC Santa Cruz Genomics Institute; Ecology and Evolutionary Biology, UC Santa Cruz

Verified email at ucsc.edu

ancient DNA genomics molecular ecology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Bayesian coalescent inference of past population dynamics from molecular sequences AJ Drummond, A Rambaut, B Shapiro, OG Pybus Molecular biology and evolution 22 (5), 1185-1192, 2005	3113	2005
Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014	1708	2014
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013	886	2013
Rise and fall of the Beringian steppe bison B Shapiro, AJ Drummond, A Rambaut, MC Wilson, PE Matheus, AV Sher, ... Science 306 (5701), 1561-1565, 2004	759	2004
Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA HN Poinar, C Schwarz, J Qi, B Shapiro, RDE MacPhee, B Buigues, ... science 311 (5759), 392-394, 2006	742	2006
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences B Shapiro, A Rambaut, AJ Drummond Molecular biology and evolution 23 (1), 7-9, 2006	739	2006
Diverse plant and animal genetic records from Holocene and Pleistocene sediments E Willerslev, AJ Hansen, J Binladen, TB Brand, MTP Gilbert, B Shapiro, ... Science 300 (5620), 791-795, 2003	732	2003
Species-specific responses of Late Quaternary megafauna to climate and humans ED Lorenzen, D Nogués-Bravo, L Orlando, J Weinstock, J Binladen, ... Nature 479 (7373), 359-364, 2011	706	2011
Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs O Thalmann, B Shapiro, P Cui, VJ Schuenemann, SK Sawyer, ... Science 342 (6160), 871-874, 2013	596	2013
Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021	489	2021
Skyline‐plot methods for estimating demographic history from nucleotide sequences SYW Ho, B Shapiro Molecular ecology resources 11 (3), 423-434, 2011	463	2011
Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci MS Gill, P Lemey, NR Faria, A Rambaut, B Shapiro, MA Suchard Molecular biology and evolution 30 (3), 713-724, 2013	442	2013
Dynamics of Pleistocene population extinctions in Beringian brown bears I Barnes, P Matheus, B Shapiro, D Jensen, A Cooper Science 295 (5563), 2267-2270, 2002	420	2002
The earliest evidence for anatomically modern humans in northwestern Europe T Higham, T Compton, C Stringer, R Jacobi, B Shapiro, E Trinkaus, ... Nature 479 (7374), 521-524, 2011	357	2011
Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs CJ Edwards, R Bollongino, A Scheu, A Chamberlain, A Tresset, JD Vigne, ... Proceedings of the Royal Society B: Biological Sciences 274 (1616), 1377-1385, 2007	321	2007
Evidence for time dependency of molecular rate estimates SYW Ho, B Shapiro, MJ Phillips, A Cooper, AJ Drummond Systematic biology 56 (3), 515-522, 2007	297	2007
Prehistoric genomes reveal the genetic foundation and cost of horse domestication M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ... Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014	294	2014
Ancient hybridization and an Irish origin for the modern polar bear matriline CJ Edwards, MA Suchard, P Lemey, JJ Welch, I Barnes, TL Fulton, ... Current biology 21 (15), 1251-1258, 2011	274	2011
Using time-structured data to estimate evolutionary rates of double-stranded DNA viruses C Firth, A Kitchen, B Shapiro, MA Suchard, EC Holmes, A Rambaut Molecular biology and evolution 27 (9), 2038-2051, 2010	272	2010
The global spread of hepatitis C virus 1a and 1b: a phylodynamic and phylogeographic analysis G Magiorkinis, E Magiorkinis, D Paraskevis, SYW Ho, B Shapiro, ... PLoS medicine 6 (12), e1000198, 2009	270	2009

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