Nikolaus Sonnenschein

Cited by

	All	Since 2019
Citations	3731	2574
h-index	24	22
i10-index	32	30

540

270

135

405

201220132014201520162017201820192020202120222023202419 63 116 172 211 261 280 286 378 460 483 528 435

Public access

View all

30 articles

0 articles

available

not available

Based on funding mandates

Co-authors

Markus HerrgardCTO, BioInnovation InstituteVerified email at bii.dk
Benjamín J. SánchezSenior Research Scientist @ Chr. HansenVerified email at chr-hansen.com
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, SwedenVerified email at chalmers.se
Christian LievenNovo Nordisk Foundation Center for BiosustainabilityVerified email at biosustain.dtu.dk
Kristian JensenTechnical University of DenmarkVerified email at biosustain.dtu.dk
Moritz Emanuel BeberUnseen Bio ApSVerified email at unseenbio.com
Marc HüttProfessor of Computational Systems Biology, Constructor UniversityVerified email at constructor.university
Eduard J KerkhovenDocent, Chalmers University of TechnologyVerified email at chalmers.se
Iván DomenzainChalmers University of Technology | AixBioVerified email at chalmers.se
Andreas DrägerProfessor for Data Analytics and BioinformaticsVerified email at informatik.uni-halle.de
Nathan E LewisProfessor, University of California, San DiegoVerified email at ucsd.edu
Zachary A. KingVerified email at ucsd.edu
Ali EbrahimUniversity of California, San DiegoVerified email at ucsd.edu
Irina BorodinaThe Novo Nordisk Foundation Center for Biosustainability, Technical University of DenmarkVerified email at biosustain.dtu.dk
Daniel C. ZielinskiProject Scientist, University of California San DiegoVerified email at ucsd.edu
Rebecca M LennenSenior Researcher, Novo Nordisk Foundation Center for Biosustainability, Technical University ofVerified email at biosustain.dtu.dk
Michael Krogh JensenSenior researcher, Technical University of Denmark; CEO & Co-founder at BiomiaVerified email at biosustain.dtu.dk
Jay KeaslingProfessor of Chemical & Biomolecular Engineering and of Bioengineering, University of CaliforniaVerified email at lbl.gov
Jie ZhangNovo Nordisk Foundation Center for Biosustainability, Technical University of DenmarkVerified email at biosustain.dtu.dk
Aarash BordbarSinopia BiosciencesVerified email at sinopiabio.com

Nikolaus Sonnenschein

Ginkgo Bioworks

Verified email at ginkgobioworks.com

Biotechnology


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	1204	2013
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson PLoS computational biology 11 (8), e1004321, 2015	400	2015
MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020	381	2020
A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism H Lu, F Li, BJ Sánchez, Z Zhu, G Li, I Domenzain, S Marcišauskas, ... Nature communications 10 (1), 3586, 2019	317	2019
Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics A Bordbar, D McCloskey, DC Zielinski, N Sonnenschein, N Jamshidi, ... Cell Systems 1 (4), 283-292, 2015	118	2015
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0 I Domenzain, B Sánchez, M Anton, EJ Kerkhoven, A Millán-Oropeza, ... Nature communications 13 (1), 3766, 2022	97	2022
Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance KR Kildegaard, BM Hallström, TH Blicher, N Sonnenschein, NB Jensen, ... Metabolic engineering 26, 57-66, 2014	96	2014
Improving reproducibility in synthetic biology MM Jessop-Fabre, N Sonnenschein Frontiers in bioengineering and biotechnology 7, 436850, 2019	86	2019
Engineering an NADPH/NADP⁺ Redox Biosensor in Yeast J Zhang, N Sonnenschein, TPB Pihl, KR Pedersen, MK Jensen, ... ACS synthetic biology 5 (12), 1546-1556, 2016	84	2016
Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production … MJ Massaiu, I., Pasotti, L., Sonnenschein, N., Rama, E., Cavaletti, M ... Microbial Cell Factories 18 (3), 2019	82	2019
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies IE Elsemman, A Rodriguez Prado, P Grigaitis, M Garcia Albornoz, ... Nature communications 13 (1), 801, 2022	70	2022
Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories JGR Cardoso, K Jensen, C Lieven, AS Lærke Hansen, S Galkina, ... ACS synthetic biology 7 (4), 1163-1166, 2018	70	2018
Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular Systems Biology 11 (10), 831, 2015	64	2015
Analog regulation of metabolic demand N Sonnenschein, M Geertz, G Muskhelishvili, MT Hütt BMC systems biology 5 (1), 40, 2011	64	2011
A genome-scale metabolic model for Methylococcus capsulatus (Bath) suggests reduced efficiency electron transfer to the particulate methane monooxygenase C Lieven, LAH Petersen, SB Jørgensen, KV Gernaey, MJ Herrgard, ... Frontiers in microbiology 9, 2947, 2018	57	2018
Systems biology solutions for biochemical production challenges ASL Hansen, RM Lennen, N Sonnenschein, MJ Herrgård Current Opinion in Biotechnology 45, 85-91, 2017	53	2017
OptCouple: Joint simulation of gene knockouts, insertions and medium modifications for prediction of growth-coupled strain designs K Jensen, V Broeken, ASL Hansen, N Sonnenschein, MJ Herrgård Metabolic engineering communications 8, e00087, 2019	48	2019
Artefacts in statistical analyses of network motifs: general framework and application to metabolic networks ME Beber, C Fretter, S Jain, N Sonnenschein, M Müller-Hannemann, ... Journal of The Royal Society Interface, 2012	47	2012
Analysis of genetic variation and potential applications in genome-scale metabolic modeling JGR Cardoso, MR Andersen, MJ Herrgård, N Sonnenschein Frontiers in bioengineering and biotechnology 3, 13, 2015	45	2015
Genome-Wide CRISPRi-Based Identification of Targets for Decoupling Growth from Production S Li, CB Jendresen, J Landberg, LE Pedersen, N Sonnenschein, ... ACS Synthetic Biology 9 (5), 1030-1040, 2020	39	2020

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors