| Human coronavirus NL63 molecular epidemiology and evolutionary patterns in rural coastal Kenya PK Kiyuka, CN Agoti, PK Munywoki, R Njeru, A Bett, JR Otieno, GP Otieno, ... The Journal of infectious diseases 217 (11), 1728-1739, 2018 | 149 | 2018 |
| Rapid spread and diversification of respiratory syncytial virus genotype ON1, Kenya CN Agoti, JR Otieno, CW Gitahi, PA Cane, DJ Nokes Emerging infectious diseases 20 (6), 950, 2014 | 95 | 2014 |
| Local evolutionary patterns of human respiratory syncytial virus derived from whole-genome sequencing CN Agoti, JR Otieno, PK Munywoki, AG Mwihuri, PA Cane, DJ Nokes, ... Journal of virology 89 (7), 3444-3454, 2015 | 91 | 2015 |
| Spread and evolution of respiratory syncytial virus A genotype ON1, Coastal Kenya, 2010–2015 JR Otieno, EM Kamau, CN Agoti, C Lewa, G Otieno, A Bett, M Ngama, ... Emerging infectious diseases 23 (2), 264, 2017 | 66 | 2017 |
| SARS‐CoV‐2 infection and venous thromboembolism after surgery: an international prospective cohort study COVIDSurg Collaborative, GlobalSurg Collaborative, D Nepogodiev, ... Anaesthesia 77 (1), 28-39, 2022 | 58 | 2022 |
| New nomenclature for mpox (monkeypox) and monkeypox virus clades D Ulaeto, A Agafonov, J Burchfield, L Carter, C Happi, R Jakob, ... The Lancet Infectious Diseases 23 (3), 273-275, 2023 | 51 | 2023 |
| Description of the first global outbreak of mpox: an analysis of global surveillance data H Laurenson-Schafer, N Sklenovská, A Hoxha, SM Kerr, P Ndumbi, ... The Lancet Global Health 11 (7), e1012-e1023, 2023 | 44 | 2023 |
| Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis CN Agoti, PK Munywoki, MVT Phan, JR Otieno, E Kamau, A Bett, I Kombe, ... Virus Evolution 3 (1), vex006, 2017 | 42 | 2017 |
| Successive respiratory syncytial virus epidemics in local populations arise from multiple variant introductions, providing insights into virus persistence CN Agoti, JR Otieno, M Ngama, AG Mwihuri, GF Medley, PA Cane, ... Journal of Virology 89 (22), 11630-11642, 2015 | 42 | 2015 |
| Molecular evolutionary dynamics of respiratory syncytial virus group A in recurrent epidemics in coastal Kenya JR Otieno, CN Agoti, CW Gitahi, A Bett, M Ngama, GF Medley, PA Cane, ... Journal of Virology 90 (10), 4990-5002, 2016 | 39 | 2016 |
| Whole genome analysis of local Kenyan and global sequences unravels the epidemiological and molecular evolutionary dynamics of RSV genotype ON1 strains JR Otieno, EM Kamau, JW Oketch, JM Ngoi, AM Gichuki, Š Binter, ... Virus evolution 4 (2), vey027, 2018 | 35 | 2018 |
| Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007–2016 JW Oketch, E Kamau, GP Otieno, JR Otieno, CN Agoti, DJ Nokes BMC infectious diseases 19, 1-13, 2019 | 29 | 2019 |
| Examining strain diversity and phylogeography in relation to an unusual epidemic pattern of respiratory syncytial virus (RSV) in a long-term refugee camp in Kenya CN Agoti, LM Mayieka, JR Otieno, JA Ahmed, BS Fields, LW Waiboci, ... BMC infectious diseases 14, 1-14, 2014 | 24 | 2014 |
| Endemic chikungunya fever in Kenyan children: a prospective cohort study DK Nyamwaya, M Otiende, DO Omuoyo, G Githinji, HK Karanja, ... BMC Infectious Diseases 21, 1-10, 2021 | 19 | 2021 |
| When to update COVID-19 vaccine composition R Grant, JA Sacks, P Abraham, S Chunsuttiwat, C Cohen, JP Figueroa, ... Nature Medicine 29 (4), 776-780, 2023 | 18 | 2023 |
| As Clear as Mud? Determining the Diversity and Prevalence of Prophages in the Draft Genomes of Estuarine Isolates of Clostridium difficile KR Hargreaves, JR Otieno, A Thanki, MJ Blades, AD Millard, HP Browne, ... Genome Biology and Evolution 7 (7), 1842-1855, 2015 | 18 | 2015 |
| Evolution of respiratory syncytial virus genotype BA in Kilifi, Kenya, 15 years on E Kamau, JR Otieno, CS Lewa, A Mwema, N Murunga, DJ Nokes, ... Scientific Reports 10 (1), 21176, 2020 | 13 | 2020 |
| Origins and evolution of seasonal human coronaviruses JR Otieno, JL Cherry, DJ Spiro, MI Nelson, NS Trovão Viruses 14 (7), 1551, 2022 | 10 | 2022 |
| Peripheral blood mononuclear cell transcriptomes reveal an over-representation of down-regulated genes associated with immunity in HIV-exposed uninfected infants ZD Musimbi, MK Rono, JR Otieno, N Kibinge, LI Ochola-Oyier, ... Scientific Reports 9 (1), 18124, 2019 | 10 | 2019 |
| Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis. Virus Evol. 2017; 3 (1): vex006 CN Agoti, PK Munywoki, MVT Phan, JR Otieno, E Kamau, A Bett Epub 2017/05/02. https://doi. org/10.1093/ve/vex006 PMID: 28458916, 0 | 9 | |
D. James NokesProfessor of Infectious Disease Epidemiology, KEMRI-Wellcome Trust, Kenya; University of Warwick, UKVerificeret mail på kemri-wellcome.org
