|Novel variation and de novo mutation rates in population-wide de novo assembled Danish trios|
S Besenbacher, S Liu, JMG Izarzugaza, J Grove, K Belling, J Bork-Jensen, ...
Nature communications 6 (1), 1-9, 2015
|DNA methylation and mRNA and microRNA expression of SLE CD4+ T cells correlate with disease phenotype|
M Zhao, S Liu, S Luo, H Wu, M Tang, W Cheng, Q Zhang, P Zhang, X Yu, ...
Journal of autoimmunity 54, 127-136, 2014
|Genomic analyses from non-invasive prenatal testing reveal genetic associations, patterns of viral infections, and Chinese population history|
S Liu, S Huang, F Chen, L Zhao, Y Yuan, SS Francis, L Fang, Z Li, L Lin, ...
Cell 175 (2), 347-359. e14, 2018
|Sequencing and de novo assembly of 150 genomes from Denmark as a population reference|
L Maretty, JM Jensen, B Petersen, JA Sibbesen, S Liu, P Villesen, L Skov, ...
Nature 548 (7665), 87-91, 2017
|Differential DNA methylation in discrete developmental stages of the parasitic nematode Trichinella spiralis|
F Gao, X Liu, XP Wu, XL Wang, D Gong, H Lu, Y Xia, Y Song, J Wang, ...
Genome biology 13 (10), 1-13, 2012
|De novo assembly of a haplotype-resolved human genome|
H Cao, H Wu, R Luo, S Huang, Y Sun, X Tong, Y Xie, B Liu, H Yang, ...
Nature biotechnology 33 (6), 617-622, 2015
|Bisulfite sequencing reveals that Aspergillus flavus holds a hollow in DNA methylation|
SY Liu, JQ Lin, HL Wu, CC Wang, SJ Huang, YF Luo, JH Sun, JX Zhou, ...
PloS one 7 (1), e30349, 2012
|Systematic assessment of reduced representation bisulfite sequencing to human blood samples: A promising method for large-sample-scale epigenomic studies|
L Wang, J Sun, H Wu, S Liu, J Wang, B Wu, S Huang, N Li, J Wang, ...
Journal of biotechnology 157 (1), 1-6, 2012
|Initial whole-genome sequencing and analysis of the host genetic contribution to COVID-19 severity and susceptibility|
F Wang, S Huang, R Gao, Y Zhou, C Lai, Z Li, W Xian, X Qian, Z Li, ...
Cell discovery 6 (1), 1-16, 2020
|Accurate genotyping across variant classes and lengths using variant graphs|
JA Sibbesen, L Maretty, A Krogh
Nature genetics 50 (7), 1054-1059, 2018
|High-throughput sequencing of methylated cytosine enriched by modification-dependent restriction endonuclease MspJI|
X Huang, H Lu, JW Wang, L Xu, S Liu, J Sun, F Gao
BMC genetics 14 (1), 1-9, 2013
|Discovery, genotyping and characterization of structural variation and novel sequence at single nucleotide resolution from de novo genome assemblies on a …|
S Liu, S Huang, J Rao, W Ye, Genome Denmark Consortium, A Krogh, ...
Gigascience 4 (1), s13742-015-0103-4, 2015
|Draft genome sequences of Vibrio alginolyticus strains V1 and V2, opportunistic marine pathogens|
D Castillo, P D’Alvise, PG Kalatzis, C Kokkari, M Middelboe, L Gram, S Liu, ...
Genome announcements 3 (4), 2015
|Assembly and analysis of 100 full MHC haplotypes from the Danish population|
JM Jensen, P Villesen, RM Friborg, T Mailund, S Besenbacher, ...
Genome research 27 (9), 1597-1607, 2017
|Benchmarking the HLA typing performance of Polysolver and Optitype in 50 Danish parental trios|
ML Matey-Hernandez, S Brunak, JMG Izarzugaza
BMC bioinformatics 19 (1), 1-12, 2018
|Stochastic anomaly of methylome but persistent SRY hypermethylation in disorder of sex development in canine somatic cell nuclear transfer|
YH Jeong, H Lu, CH Park, M Li, H Luo, JJ Kim, S Liu, KH Ko, S Huang, ...
Scientific reports 6 (1), 1-11, 2016
|Draft genome sequences of the fish pathogen Vibrio harveyi strains VH2 and VH5|
D Castillo, P D’Alvise, M Middelboe, L Gram, S Liu, PG Kalatzis, C Kokkari, ...
Genome announcements 3 (5), 2015
|Draft genome sequence of Vibrio parahaemolyticus VH3, isolated from an aquaculture environment in Greece|
D Castillo, JW Jun, P D’Alvise, M Middelboe, L Gram, S Liu, P Katharios
Genome announcements 3 (4), 2015
|The genetic architecture of sporadic and multiple consecutive miscarriage|
T Laisk, ALG Soares, T Ferreira, JN Painter, JC Censin, S Laber, J Bacelis, ...
Nature communications 11 (1), 1-12, 2020
|Large-scale Inference of Population Structure in Presence of Missingness using PCA|
J Meisner, A Albrechtsen, S Liu, M Huang