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Charlotte A Darby
Charlotte A Darby
Takeda Pharmaceuticals
Verified email at jhu.edu - Homepage
Title
Cited by
Cited by
Year
Integrated analysis of multimodal single-cell data
Y Hao, S Hao, E Andersen-Nissen, WM Mauck III, S Zheng, A Butler, ...
Cell 184 (13), 3573-3587. e29, 2021
15852021
Piercing the dark matter: bioinformatics of long-range sequencing and mapping
FJ Sedlazeck, H Lee, CA Darby, MC Schatz
Nature Reviews Genetics 19 (6), 329-346, 2018
3342018
Xenolog classification
CA Darby, M Stolzer, PJ Ropp, D Barker, D Durand
Bioinformatics 33 (5), 640-649, 2017
412017
LRSim: a linked-reads simulator generating insights for better genome partitioning
R Luo, FJ Sedlazeck, CA Darby, SM Kelly, MC Schatz
Computational and structural biotechnology journal 15, 478-484, 2017
322017
Clonal hematopoiesis before, during, and after human spaceflight
N Mencia-Trinchant, MJ MacKay, C Chin, E Afshinnekoo, J Foox, ...
Cell Reports 33 (10), 108458, 2020
152020
Vargas: heuristic-free alignment for assessing linear and graph read aligners
CA Darby, R Gaddipati, MC Schatz, B Langmead
Bioinformatics 36 (12), 3712-3718, 2020
142020
Integrated analysis of multimodal single-cell data. bioRxiv
Y Hao, S Hao, E Andersen-Nissen, WM Mauck, S Zheng, A Butler, MJ Lee, ...
Posted October 12 (2020), 10.1101, 2020
132020
scHLAcount: allele-specific HLA expression from single-cell gene expression data
CA Darby, MJT Stubbington, PJ Marks, Á Martínez Barrio, IT Fiddes
Bioinformatics 36 (12), 3905-3906, 2020
82020
Samovar: Single-Sample Mosaic Single-Nucleotide Variant Calling with Linked Reads
CA Darby, JR Fitch, PJ Brennan, BJ Kelly, N Bir, V Magrini, J Leonard, ...
Iscience 18, 1-10, 2019
32019
Computational methods addressing genetic variation in next-generation sequencing data
CA Darby
Johns Hopkins University, 2020
2020
simpops. mac: population time series simulation script from" The effects of environmental perturbation and measurement error on estimates of the shape parameter in the theta …
D Barker, R Sibly
2017
Preprocessed gene trees from" Xenolog Classification"
C Darby, M Stolzer, P Ropp, D Barker, D Durand
2016
Correction with TreeSolver
C Darby, M Stolzer, D Dur, F Abate, S Zairis, E Ficarra, A Acquaviva, ...
2014
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Articles 1–13