Gustavo Arango Argoty
Gustavo Arango Argoty
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DeepARG: a deep learning approach for predicting antibiotic resistance genes from metagenomic data
G Arango-Argoty, E Garner, A Pruden, LS Heath, P Vikesland, L Zhang
Microbiome 6, 1-15, 2018
Secure coding practices in java: Challenges and vulnerabilities
N Meng, S Nagy, D Yao, W Zhuang, GA Argoty
Proceedings of the 40th International Conference on Software Engineering …, 2018
An in-depth map of polyadenylation sites in cancer
Y Lin, Z Li, F Ozsolak, SW Kim, G Arango-Argoty, TT Liu, SA Tenenbaum, ...
Nucleic acids research 40 (17), 8460-8471, 2012
NanoARG: a web service for detecting and contextualizing antimicrobial resistance genes from nanopore-derived metagenomes
GA Arango-Argoty, D Dai, A Pruden, P Vikesland, LS Heath, L Zhang
Microbiome 7, 1-18, 2019
Metagenomic profiling of historic Colorado Front Range flood impact on distribution of riverine antibiotic resistance genes
E Garner, JS Wallace, GA Argoty, C Wilkinson, N Fahrenfeld, LS Heath, ...
Scientific reports 6 (1), 38432, 2016
MetaStorm: a public resource for customizable metagenomics annotation
G Arango-Argoty, G Singh, LS Heath, A Pruden, W Xiao, L Zhang
PloS one 11 (9), e0162442, 2016
Apigenin Impacts the Growth of the Gut Microbiota and Alters the Gene Expression of Enterococcus
M Wang, J Firrman, L Zhang, G Arango-Argoty, P Tomasula, LS Liu, ...
Molecules 22 (8), 1292, 2017
ARGminer: a web platform for the crowdsourcing-based curation of antibiotic resistance genes
GA Arango-Argoty, GKP Guron, E Garner, MV Riquelme, LS Heath, ...
Bioinformatics 36 (9), 2966-2973, 2020
The effect of quercetin on genetic expression of the commensal gut microbes Bifidobacterium catenulatum, Enterococcus caccae and Ruminococcus gauvreauii
J Firrman, LS Liu, L Zhang, GA Argoty, M Wang, P Tomasula, M Kobori, ...
Anaerobe 42, 130-141, 2016
Identification of discriminatory antibiotic resistance genes among environmental resistomes using extremely randomized tree algorithm
S Gupta, G Arango-Argoty, L Zhang, A Pruden, P Vikesland
Microbiome 7, 1-15, 2019
Effects of dairy manure-based amendments and soil texture on lettuce-and radish-associated microbiota and resistomes
GKP Guron, G Arango-Argoty, L Zhang, A Pruden, MA Ponder
Msphere 4 (3), 10.1128/msphere. 00239-19, 2019
Demonstrating a comprehensive wastewater-based surveillance approach that differentiates globally sourced resistomes
MV Prieto Riquelme, E Garner, S Gupta, J Metch, N Zhu, MF Blair, ...
Environmental Science & Technology 56 (21), 14982-14993, 2022
Comparison of whole-genome sequences of Legionella pneumophila in tap water and in clinical strains, Flint, Michigan, USA, 2016
E Garner, CL Brown, DO Schwake, WJ Rhoads, G Arango-Argoty, ...
Emerging infectious diseases 25 (11), 2013, 2019
Noncoding RNAs that associate with YB-1 alter proliferation in prostate cancer cells
TT Liu, G Arango-Argoty, Z Li, Y Lin, SW Kim, A Dueck, F Ozsolak, ...
Rna 21 (6), 1159-1172, 2015
Analysis of temporal changes in growth and gene expression for commensal gut microbes in response to the polyphenol naringenin
J Firrman, LS Liu, GA Argoty, L Zhang, P Tomasula, M Wang, S Pontious, ...
Microbiology insights 11, 1178636118775100, 2018
Enhanced GII. 4 human norovirus infection in gnotobiotic pigs transplanted with a human gut microbiota
S Lei, EL Twitchell, AK Ramesh, T Bui, E Majette, CM Tin, R Avery, ...
Journal of General Virology 100 (11), 1530-1540, 2019
Triclosan has a robust, yet reversible impact on human gut microbial composition in vitro
KK Mahalak, J Firrman, JJ Lee, K Bittinger, A Nuņez, LM Mattei, H Zhang, ...
Plos one 15 (6), e0234046, 2020
Wastewater based epidemiology enabled surveillance of antibiotic resistance
MV Riquelme, E Garner, S Gupta, J Metch, N Zhu, MF Blair, ...
medRxiv, 2021.06. 01.21258164, 2021
A Pilot Study of Chicago Waterways as Reservoirs of Multidrug-Resistant Enterobacteriaceae (MDR-Ent) in a High-Risk Region for Community-Acquired MDR-Ent …
LK Logan, L Zhang, SJ Green, S Dorevitch, GA Arango-Argoty, K Reme, ...
Antimicrobial Agents and Chemotherapy 64 (4), 10.1128/aac. 02310-19, 2020
Explainable transformer-based neural network for the prediction of survival outcomes in non-small cell lung cancer (NSCLC)
E Kipkogei, GA Arango Argoty, I Kagiampakis, A Patra, E Jacob
medRxiv, 2021.10. 11.21264761, 2021
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