Simon Cockell
Simon Cockell
Senior Experimental Scientific Officer, Newcastle University
Verified email at newcastle.ac.uk - Homepage
Title
Cited by
Cited by
Year
BioStar: an online question & answer resource for the bioinformatics community
LD Parnell, P Lindenbaum, K Shameer, GM Dall'Olio, DC Swan, ...
PLoS Comput Biol 7 (10), e1002216, 2011
772011
Regulation of p53 and Rb links the alternative NF-κB pathway to EZH2 expression and cell senescence
A Iannetti, AC Ledoux, SJ Tudhope, H Sellier, B Zhao, S Mowla, A Moore, ...
PLoS Genet 10 (9), e1004642, 2014
712014
MRE11 facilitates the removal of human topoisomerase II complexes from genomic DNA
KC Lee, K Padget, H Curtis, IG Cowell, D Moiani, Z Sondka, NJ Morris, ...
Biology open 1 (9), 863-873, 2012
492012
Analysis of primary visual cortex in dementia with Lewy bodies indicates GABAergic involvement associated with recurrent complex visual hallucinations
AA Khundakar, PS Hanson, D Erskine, NZ Lax, J Roscamp, E Karyka, ...
Acta neuropathologica communications 4 (1), 66, 2016
432016
Contribution of natural antisense transcription to an endogenous siRNA signature in human cells
A Werner, S Cockell, J Falconer, M Carlile, S Alnumeir, J Robinson
BMC genomics 15 (1), 19, 2014
422014
Zinc sensing by metal-responsive transcription factor 1 (MTF1) controls metallothionein and ZnT1 expression to buffer the sensitivity of the transcriptome response to zinc
JEJ Hardyman, J Tyson, KA Jackson, C Aldridge, SJ Cockell, ...
Metallomics 8 (3), 337-343, 2016
412016
Structure− function studies of an engineered scaffold protein derived from Stefin A. II: Development and applications of the SQT variant
LKJ Stadler, T Hoffmann, DC Tomlinson, Q Song, T Lee, M Busby, ...
Protein Engineering, Design & Selection 24 (9), 751-763, 2011
372011
An integrated dataset for in silico drug discovery
SJ Cockell, J Weile, P Lord, C Wipat, D Andriychenko, M Pocock, ...
Journal of integrative bioinformatics 7 (3), 15-27, 2010
332010
Misincorporation by RNA polymerase is a major source of transcription pausing in vivo
K James, P Gamba, SJ Cockell, N Zenkin
Nucleic acids research 45 (3), 1105-1113, 2017
302017
Transcriptomics and proteomics show that selenium affects inflammation, cytoskeleton, and cancer pathways in human rectal biopsies
C Méplan, IT Johnson, ACJ Polley, S Cockell, DM Bradburn, ...
The FASEB Journal 30 (8), 2812-2825, 2016
292016
An integrated data driven approach to drug repositioning using gene-disease associations
J Mullen, SJ Cockell, P Woollard, A Wipat
PloS one 11 (5), e0155811, 2016
292016
The zinc finger protein ZNF658 regulates the transcription of genes involved in zinc homeostasis and affects ribosome biogenesis through the zinc transcriptional regulatory element
OA Ogo, J Tyson, SJ Cockell, A Howard, RA Valentine, D Ford
Molecular and cellular biology 35 (6), 977-987, 2015
272015
The NF-κB subunit c-Rel regulates Bach2 tumour suppressor expression in B-cell lymphoma
JE Hunter, JA Butterworth, B Zhao, H Sellier, KJ Campbell, HD Thomas, ...
Oncogene 35 (26), 3476-3484, 2016
262016
Genome-wide ChIP-seq analysis of human TOP2B occupancy in MCF7 breast cancer epithelial cells
CM Manville, K Smith, Z Sondka, H Rance, S Cockell, IG Cowell, KC Lee, ...
Biology open 4 (11), 1436-1447, 2015
252015
Structure-based evaluation of in silico predictions of protein–protein interactions using Comparative Docking
SJ Cockell, B Oliva, RM Jackson
Bioinformatics 23 (5), 573-581, 2007
252007
Deconstructing retinal organoids: single cell RNA‐seq reveals the cellular components of human pluripotent stem cell‐derived retina
J Collin, R Queen, D Zerti, B Dorgau, R Hussain, J Coxhead, S Cockell, ...
Stem Cells 37 (5), 593-598, 2019
222019
Guidelines for reporting the use of gel image informatics in proteomics
C Hoogland, M O'Gorman, P Bogard, F Gibson, M Berth, SJ Cockell, ...
Nature biotechnology 28 (7), 655-656, 2010
222010
Epigenetic landscape correlates with genetic subtype but does not predict outcome in childhood acute lymphoblastic leukemia
AS Gabriel, FM Lafta, EC Schwalbe, S Nakjang, SJ Cockell, A Iliasova, ...
Epigenetics 10 (8), 717-726, 2015
192015
Changes in Protein Expression Profiles between a Low Phytic Acid Rice (Oryza sativa L. Ssp. japonica) Line and Its Parental Line: A Proteomic and Bioinformatic …
K Emami, NJ Morris, SJ Cockell, G Golebiowska, QY Shu, ...
Journal of agricultural and food chemistry 58 (11), 6912-6922, 2010
192010
Utility of B-13 progenitor-derived hepatocytes in hepatotoxicity and genotoxicity studies
PME Probert, GW Chung, SJ Cockell, L Agius, P Mosesso, SA White, ...
toxicological sciences 137 (2), 350-370, 2014
182014
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