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Bryan Daniels
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Perspective: Sloppiness and emergent theories in physics, biology, and beyond
MK Transtrum, BB Machta, KS Brown, BC Daniels, CR Myers, JP Sethna
The Journal of chemical physics 143 (1), 2015
3412015
Sloppiness, robustness, and evolvability in systems biology
BC Daniels, YJ Chen, JP Sethna, RN Gutenkunst, CR Myers
Current opinion in biotechnology 19 (4), 389-395, 2008
2362008
Abrupt buckling transition observed during the plectoneme formation of individual DNA molecules
S Forth, C Deufel, MY Sheinin, B Daniels, JP Sethna, MD Wang
Physical review letters 100 (14), 148301, 2008
2362008
Automated adaptive inference of phenomenological dynamical models
BC Daniels, I Nemenman
Nature communications 6 (1), 8133, 2015
2192015
Criticality distinguishes the ensemble of biological regulatory networks
BC Daniels, H Kim, D Moore, S Zhou, HB Smith, B Karas, SA Kauffman, ...
Physical review letters 121 (13), 138102, 2018
1142018
Individual and collective encoding of risk in animal groups
MMG Sosna, CR Twomey, J Bak-Coleman, W Poel, BC Daniels, ...
Proceedings of the National Academy of Sciences 116 (41), 20556-20561, 2019
962019
Efficient inference of parsimonious phenomenological models of cellular dynamics using S-systems and alternating regression
BC Daniels, I Nemenman
PloS one 10 (3), e0119821, 2015
912015
Synchronization of coupled rotators: Josephson junction ladders and the locally coupled Kuramoto model
BC Daniels, STM Dissanayake, BR Trees
Physical Review E 67 (2), 026216, 2003
632003
Control of finite critical behaviour in a small-scale social system
BC Daniels, DC Krakauer, JC Flack
Nature communications 8 (1), 14301, 2017
602017
Discontinuities at the DNA supercoiling transition
BC Daniels, S Forth, MY Sheinin, MD Wang, JP Sethna
Physical Review E 80 (4), 040901, 2009
472009
Quantifying collectivity
BC Daniels, CJ Ellison, DC Krakauer, JC Flack
Current opinion in neurobiology 37, 106-113, 2016
462016
Quantifying dynamical high-order interdependencies from the o-information: An application to neural spiking dynamics
S Stramaglia, T Scagliarini, BC Daniels, D Marinazzo
Frontiers in Physiology 11, 595736, 2021
402021
Dual coding theory explains biphasic collective computation in neural decision-making
BC Daniels, JC Flack, DC Krakauer
Frontiers in Neuroscience 11, 257214, 2017
362017
Synchronization of globally coupled nonlinear oscillators: the rich behavior of the Kuramoto model
BC Daniels
Ohio Wesleyan Physics Dept., Essay 7 (2), 20, 2005
342005
Sparse code of conflict in a primate society
BC Daniels, DC Krakauer, JC Flack
Proceedings of the National Academy of Sciences 109 (35), 14259-14264, 2012
292012
Subcritical escape waves in schooling fish
W Poel, BC Daniels, MMG Sosna, CR Twomey, SP Leblanc, ID Couzin, ...
Science Advances 8 (25), eabm6385, 2022
282022
The basis of easy controllability in Boolean networks
E Borriello, BC Daniels
Nature communications 12 (1), 5227, 2021
282021
Mesoscopic statistical properties of multistep enzyme-mediated reactions
WH de Ronde, BC Daniels, A Mugler, NA Sinitsyn, I Nemenman
IET systems biology 3 (5), 429-437, 2009
262009
Automated, predictive, and interpretable inference of Caenorhabditis elegans escape dynamics
BC Daniels, WS Ryu, I Nemenman
Proceedings of the National Academy of Sciences 116 (15), 7226-7231, 2019
252019
Network analysis for the digital humanities: principles, problems, extensions
DT Painter, BC Daniels, J Jost
Isis 110 (3), 538-554, 2019
232019
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