Eivind Valen
Eivind Valen
Group Leader, University of Bergen
Verified email at fas.harvard.edu - Homepage
TitleCited byYear
An atlas of active enhancers across human cell types and tissues
R Andersson, C Gebhard, I Miguel-Escalada, I Hoof, J Bornholdt, M Boyd, ...
Nature 507 (7493), 455, 2014
13722014
JASPAR, the open access database of transcription factor-binding profiles: new content and tools in the 2008 update
JC Bryne, E Valen, MHE Tang, T Marstrand, O Winther, I da Piedade, ...
Nucleic acids research 36 (suppl_1), D102-D106, 2007
7332007
A promoter-level mammalian expression atlas
ARR Forrest, H Kawaji, M Rehli, JK Baillie, MJL De Hoon, V Haberle, ...
Nature 507 (7493), 462, 2014
7092014
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
E Portales-Casamar, S Thongjuea, AT Kwon, D Arenillas, X Zhao, ...
Nucleic acids research 38 (suppl_1), D105-D110, 2009
6432009
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
A Pauli, E Valen, MF Lin, M Garber, NL Vastenhouw, JZ Levin, L Fan, ...
Genome research 22 (3), 577-591, 2012
5942012
CHOPCHOP: a CRISPR/Cas9 and TALEN web tool for genome editing
TG Montague, JM Cruz, JA Gagnon, GM Church, E Valen
Nucleic acids research 42 (W1), W401-W407, 2014
5492014
Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs
JA Gagnon, E Valen, SB Thyme, P Huang, L Ahkmetova, A Pauli, ...
PloS one 9 (5), e98186, 2014
4552014
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
H Suzuki, ARR Forrest, E Van Nimwegen, CO Daub, PJ Balwierz, ...
Nature genetics 41 (5), 553, 2009
3982009
CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering
K Labun, TG Montague, JA Gagnon, SB Thyme, E Valen
Nucleic acids research 44 (W1), W272-W276, 2016
3302016
Toddler: an embryonic signal that promotes cell movement via Apelin receptors
A Pauli, ML Norris, E Valen, GL Chew, JA Gagnon, S Zimmerman, ...
Science 343 (6172), 1248636, 2014
3052014
Ribosome profiling reveals resemblance between long non-coding RNAs and 5′ leaders of coding RNAs
GL Chew, A Pauli, JL Rinn, A Regev, AF Schier, E Valen
Development 140 (13), 2828-2834, 2013
2072013
Polyadenylation site–induced decay of upstream transcripts enforces promoter directionality
E Ntini, AI Järvelin, J Bornholdt, Y Chen, M Boyd, M Jørgensen, ...
Nature structural & molecular biology 20 (8), 923, 2013
1982013
A code for transcription initiation in mammalian genomes
MC Frith, E Valen, A Krogh, Y Hayashizaki, P Carninci, A Sandelin
Genome research 18 (1), 1-12, 2008
1932008
PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters
P Preker, K Almvig, MS Christensen, E Valen, CK Mapendano, ...
Nucleic acids research 39 (16), 7179-7193, 2011
1402011
Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE
E Valen, G Pascarella, A Chalk, N Maeda, M Kojima, C Kawazu, M Murata, ...
Genome research 19 (2), 255-265, 2009
1362009
The genome landscape of ERα-and ERβ-binding DNA regions
Y Liu, H Gao, TT Marstrand, A Ström, E Valen, A Sandelin, JÅ Gustafsson, ...
Proceedings of the National Academy of Sciences 105 (7), 2604-2609, 2008
1262008
Efficient CRISPR-Cas9-mediated generation of knockin human pluripotent stem cells lacking undesired mutations at the targeted locus
FT Merkle, WM Neuhausser, D Santos, E Valen, JA Gagnon, K Maas, ...
Cell reports 11 (6), 875-883, 2015
1072015
Genome-wide nucleosome map and cytosine methylation levels of an ancient human genome
JS Pedersen, E Valen, AMV Velazquez, BJ Parker, M Rasmussen, ...
Genome research 24 (3), 454-466, 2014
1072014
Nuclear stability and transcriptional directionality separate functionally distinct RNA species
R Andersson, PR Andersen, E Valen, LJ Core, J Bornholdt, M Boyd, ...
Nature communications 5, 5336, 2014
992014
Biogenic mechanisms and utilization of small RNAs derived from human protein-coding genes
E Valen, P Preker, PR Andersen, X Zhao, Y Chen, C Ender, A Dueck, ...
Nature structural & molecular biology 18 (9), 1075, 2011
992011
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Articles 1–20