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Vladislav Petyuk
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Year
Integrated proteogenomic characterization of human high-grade serous ovarian cancer
H Zhang, T Liu, Z Zhang, SH Payne, B Zhang, JE McDermott, JY Zhou, ...
Cell 166 (3), 755-765, 2016
6892016
Comparative analysis of proteome and transcriptome variation in mouse
A Ghazalpour, B Bennett, VA Petyuk, L Orozco, R Hagopian, IN Mungrue, ...
PLoS genetics 7 (6), e1001393, 2011
6242011
DAnTE: a statistical tool for quantitative analysis of-omics data
AD Polpitiya, WJ Qian, N Jaitly, VA Petyuk, JN Adkins, DG Camp, ...
Bioinformatics 24 (13), 1556-1558, 2008
4222008
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
3132019
Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels
P Mertins, F Yang, T Liu, DR Mani, VA Petyuk, MA Gillette, KR Clauser, ...
Molecular & cellular proteomics 13 (7), 1690-1704, 2014
3112014
Large-scale proteomic analysis of Alzheimer’s disease brain and cerebrospinal fluid reveals early changes in energy metabolism associated with microglia and astrocyte activation
ECB Johnson, EB Dammer, DM Duong, L Ping, M Zhou, L Yin, ...
Nature medicine 26 (5), 769-780, 2020
3012020
Nanodroplet processing platform for deep and quantitative proteome profiling of 10–100 mammalian cells
Y Zhu, PD Piehowski, R Zhao, J Chen, Y Shen, RJ Moore, AK Shukla, ...
Nature communications 9 (1), 1-10, 2018
2782018
Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography–mass spectrometry
P Mertins, LC Tang, K Krug, DJ Clark, MA Gritsenko, L Chen, KR Clauser, ...
Nature protocols 13 (7), 1632-1661, 2018
2232018
Liquid chromatography-mass spectrometry-based quantitative proteomics
F Xie, T Liu, WJ Qian, VA Petyuk, RD Smith
Journal of Biological Chemistry 286 (29), 25443-25449, 2011
2172011
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
2142019
Proteogenomic characterization reveals therapeutic vulnerabilities in lung adenocarcinoma
MA Gillette, S Satpathy, S Cao, SM Dhanasekaran, SV Vasaikar, K Krug, ...
Cell 182 (1), 200-225. e35, 2020
1862020
Robust algorithm for alignment of liquid chromatography− mass spectrometry analyses in an accurate mass and time tag data analysis pipeline
N Jaitly, ME Monroe, VA Petyuk, TRW Clauss, JN Adkins, RD Smith
Analytical chemistry 78 (21), 7397-7409, 2006
1782006
Sources of technical variability in quantitative LC–MS proteomics: human brain tissue sample analysis
PD Piehowski, VA Petyuk, DJ Orton, F Xie, RJ Moore, ...
Journal of proteome research 12 (5), 2128-2137, 2013
1592013
Proteogenomic characterization of endometrial carcinoma
Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ...
Cell 180 (4), 729-748. e26, 2020
1572020
Characterization of the mouse brain proteome using global proteomic analysis complemented with cysteinyl-peptide enrichment
H Wang, WJ Qian, MH Chin, VA Petyuk, RC Barry, T Liu, MA Gritsenko, ...
Journal of proteome research 5 (2), 361-369, 2006
148*2006
Prediction of cognition in Parkinson's disease with a clinical–genetic score: a longitudinal analysis of nine cohorts
G Liu, JJ Locascio, JC Corvol, B Boot, Z Liao, K Page, D Franco, K Burke, ...
The Lancet Neurology 16 (8), 620-629, 2017
1342017
Label-free quantitative LC–MS proteomics of Alzheimer’s disease and normally aged human brains
VP Andreev, VA Petyuk, HM Brewer, YV Karpievitch, F Xie, J Clarke, ...
Journal of proteome research 11 (6), 3053-3067, 2012
1272012
Proteogenomic and metabolomic characterization of human glioblastoma
LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ...
Cancer cell 39 (4), 509-528. e20, 2021
1092021
Informed-Proteomics: open-source software package for top-down proteomics
J Park, PD Piehowski, C Wilkins, M Zhou, J Mendoza, GM Fujimoto, ...
Nature methods 14 (9), 909-914, 2017
1022017
Mitochondrial dysfunction, oxidative stress, and apoptosis revealed by proteomic and transcriptomic analyses of the striata in two mouse models of Parkinson’s disease
MH Chin, WJ Qian, H Wang, VA Petyuk, JS Bloom, DM Sforza, G Lacan, ...
Journal of proteome research 7 (2), 666-677, 2008
1022008
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