| An improved branch and bound algorithm for the maximum clique problem J Konc, D Janezic MATCH Commun. Math. Comput. Chem. 58, 569-590, 2007 | 336 | 2007 |
| ProBiS algorithm for detection of structurally similar protein binding sites by local structural alignment J Konc, D Janežič Bioinformatics 26 (9), 1160-1168, 2010 | 293 | 2010 |
| ProBiS-2012: web server and web services for detection of structurally similar binding sites in proteins J Konc, D Janežič Nucleic acids research 40 (W1), W214-W221, 2012 | 103 | 2012 |
| ProBiS: a web server for detection of structurally similar protein binding sites J Konc, D Janežič Nucleic acids research 38 (suppl_2), W436-W440, 2010 | 98 | 2010 |
| LiSiCA: a software for ligand-based virtual screening and its application for the discovery of butyrylcholinesterase inhibitors S Lešnik, T Štular, B Brus, D Knez, S Gobec, D Janezic, J Konc Journal of chemical information and modeling 55 (8), 1521-1528, 2015 | 87 | 2015 |
| ENZO: a web tool for derivation and evaluation of kinetic models of enzyme catalyzed reactions S Bevc, J Konc, J Stojan, M Hodošček, M Penca, M Praprotnik, D Janežič PLoS One 6 (7), e22265, 2011 | 81 | 2011 |
| Inverse molecular docking as a novel approach to study anticarcinogenic and anti-neuroinflammatory effects of curcumin V Furlan, J Konc, U Bren Molecules 23 (12), 3351, 2018 | 77 | 2018 |
| ProBiS-ligands: a web server for prediction of ligands by examination of protein binding sites J Konc, D Janežič Nucleic acids research 42 (W1), W215-W220, 2014 | 75 | 2014 |
| ProBiS-CHARMMing: web interface for prediction and optimization of ligands in protein binding sites J Konc, BT Miller, T Štular, S Lesnik, HL Woodcock, BR Brooks, ... Journal of chemical information and modeling 55 (11), 2308-2314, 2015 | 71 | 2015 |
| Exact parallel maximum clique algorithm for general and protein graphs M Depolli, J Konc, K Rozman, R Trobec, D Janezic Journal of chemical information and modeling 53 (9), 2217-2228, 2013 | 69 | 2013 |
| ProBiS-database: precalculated binding site similarities and local pairwise alignments of PDB structures J Konc, T Česnik, JT Konc, M Penca, D Janežič Journal of chemical information and modeling 52 (2), 604-612, 2012 | 64 | 2012 |
| Protein− protein binding-sites prediction by protein surface structure conservation J Konc, D Janežič Journal of chemical information and modeling 47 (3), 940-944, 2007 | 63 | 2007 |
| Binding site comparison for function prediction and pharmaceutical discovery J Konc, D Janežič Current opinion in structural biology 25, 34-39, 2014 | 59 | 2014 |
| CANDOCK: Chemical atomic network-based hierarchical flexible docking algorithm using generalized statistical potentials J Fine, J Konc, R Samudrala, G Chopra Journal of chemical information and modeling 60 (3), 1509-1527, 2020 | 56 | 2020 |
| Nonpeptidic selective inhibitors of the chymotrypsin‐like (β5 i) subunit of the immunoproteasome I Sosič, M Gobec, B Brus, D Knez, M Živec, J Konc, S Lešnik, M Ogrizek, ... Angewandte Chemie International Edition 55 (19), 5745-5748, 2016 | 55 | 2016 |
| Discovery of New Inhibitors of d-Alanine:d-Alanine Ligase by Structure-Based Virtual Screening A Kovac, J Konc, B Vehar, JM Bostock, I Chopra, D Janezic, S Gobec Journal of medicinal chemistry 51 (23), 7442-7448, 2008 | 52 | 2008 |
| Discovery of novel potential human targets of resveratrol by inverse molecular docking K Kores, S Lesnik, U Bren, D Janezic, J Konc Journal of Chemical Information and Modeling 59 (5), 2467-2478, 2019 | 48 | 2019 |
| Structure-based function prediction of uncharacterized protein using binding sites comparison J Konc, M Hodošček, M Ogrizek, J Trykowska Konc, D Janežič PLoS computational biology 9 (11), e1003341, 2013 | 46 | 2013 |
| Stereoselective activity of 1-propargyl-4-styrylpiperidine-like analogues that can discriminate between monoamine oxidase isoforms A and B D Knez, N Colettis, LG Iacovino, M Sova, A Pišlar, J Konc, S Lešnik, ... Journal of medicinal chemistry 63 (3), 1361-1387, 2020 | 40 | 2020 |
| Identification of conserved water sites in protein structures for drug design M Jukic, J Konc, S Gobec, D Janezic Journal of Chemical Information and Modeling 57 (12), 3094-3103, 2017 | 40 | 2017 |
