Qingyu Chen

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Zhiyong LuDeputy Director for Literature Search, NCBI; Senior Investigator, NCBI-NLMVerified email at nih.gov
Yifan PengAssistant Professor at Weill Cornell MedicineVerified email at med.cornell.edu
Emily ChewNational Eye Institute/National Institutes of HealthVerified email at nei.nih.gov
Tiarnan D. L. KeenanStaff Clinician, National Eye Institute, National Institutes of HealthVerified email at nih.gov
Wai T WongVP Retinal Discovery, Janssen R&DVerified email at alum.mit.edu
Karin VerspoorExecutive Dean, School of Computing Technologies, RMIT UniversityVerified email at rmit.edu.au
Justin ZobelComputing and Information Systems, University of MelbourneVerified email at unimelb.edu.au
W John WilburSenior scientist, National Center for Biotechnology InformationVerified email at ncbi.nlm.nih.gov
Chih Hsuan WeiNCBI (National Center for Biotechnology Information) / NLM / NIHVerified email at ncbi.nlm.nih.gov
Sun KimAmazon Alexa AI; National Center for Biotechnology Information (NCBI)Verified email at amazon.com
Jingcheng Du, Ph.D.School of Biomedical Informatics, UTHealthVerified email at uth.tmc.edu
Robert LeamanResearcher, NCBI/NLM/NIHVerified email at nih.gov
Xiuzhen (Jenny) ZhangProfessor, School of Computing Technologies, RMIT University, AustraliaVerified email at rmit.edu.au
Yijia ZhangDalian Maritime UniversityVerified email at dlmu.edu.cn
catherine cukrasNational Eye Institute, NIHVerified email at nei.nih.gov
Yingying ZhuUniversity of Texas at Arlington Assistant ProfessorVerified email at uta.edu
Rezarta IslamajNational Center for Biotechnology Information, National Library of Medicine, National Institutes ofVerified email at nih.gov
Kyubum LeeAmgenVerified email at amgen.com
Cui TaoProfessor, University of Texas Health Science Center at HoustonVerified email at uth.tmc.edu
Lana YeganovaScientist, National Institutes of HealthVerified email at mail.nih.gov

Qingyu Chen

NCBI-NLM, National Institutes of Health

Verified email at nih.gov - Homepage

Text mining Machine learning Data curation BioNLP Medical Imaging Analysis


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BioWordVec, improving biomedical word embeddings with subword information and MeSH Y Zhang, Q Chen, Z Yang, H Lin, Z Lu Scientific data 6 (1), 52, 2019	356	2019
Keep up with the latest coronavirus research Q Chen, A Allot, Z Lu Nature 579 (7798), 193-193, 2020	296	2020
DeepSeeNet: a deep learning model for automated classification of patient-based age-related macular degeneration severity from color fundus photographs Y Peng, S Dharssi, Q Chen, TD Keenan, E Agrón, WT Wong, EY Chew, ... Ophthalmology 126 (4), 565-575, 2019	246	2019
LitCovid: an open database of COVID-19 literature Q Chen, A Allot, Z Lu Nucleic acids research 49 (D1), D1534-D1540, 2021	240	2021
BioSentVec: creating sentence embeddings for biomedical texts Q Chen, Y Peng, Z Lu 2019 IEEE International Conference on Healthcare Informatics (ICHI), 1-5, 2019	176	2019
ML-Net: multi-label classification of biomedical texts with deep neural networks J Du, Q Chen, Y Peng, Y Xiang, C Tao, Z Lu Journal of the American Medical Informatics Association 26 (11), 1279-1285, 2019	134	2019
An empirical study of multi-task learning on BERT for biomedical text mining Y Peng, Q Chen, Z Lu arXiv preprint arXiv:2005.02799, 2020	82	2020
A deep learning approach for automated detection of geographic atrophy from color fundus photographs TD Keenan, S Dharssi, Y Peng, Q Chen, E Agrón, WT Wong, Z Lu, ... Ophthalmology 126 (11), 1533-1540, 2019	53	2019
Artificial intelligence in action: addressing the COVID-19 pandemic with natural language processing Q Chen, R Leaman, A Allot, L Luo, CH Wei, S Yan, Z Lu Annual review of biomedical data science 4, 313-339, 2021	52	2021
Biocuration: distilling data into knowledge International Society for Biocuration PLoS Biology 16 (4), e2002846, 2018	49	2018
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine R Islamaj Doğan, S Kim, A Chatr-Aryamontri, CH Wei, DC Comeau, ... Database 2019, bay147, 2019	47	2019
Duplicates, redundancies and inconsistencies in the primary nucleotide databases: a descriptive study Q Chen, J Zobel, K Verspoor Database 2017, baw163, 2017	45	2017
LitSense: making sense of biomedical literature at sentence level A Allot, Q Chen, S Kim, R Vera Alvarez, DC Comeau, WJ Wilbur, Z Lu Nucleic acids research 47 (W1), W594-W599, 2019	42	2019
BioConceptVec: creating and evaluating literature-based biomedical concept embeddings on a large scale Q Chen, K Lee, S Yan, S Kim, CH Wei, Z Lu PLoS computational biology 16 (4), e1007617, 2020	41	2020
A multi-task deep learning model for the classification of Age-related Macular Degeneration Q Chen, Y Peng, T Keenan, S Dharssi, E Agro, W Wai, E Chew, Z Lu AMIA Summits on Translational Science Proceedings 2019, 505, 2019	41	2019
Integrating bdi agents into a matsim simulation L Padgham, K Nagel, D Singh, Q Chen ECAI 2014, 681-686, 2014	40	2014
Predicting risk of late age-related macular degeneration using deep learning Y Peng, TD Keenan, Q Chen, E Agrón, A Allot, WT Wong, EY Chew, Z Lu NPJ digital medicine 3 (1), 111, 2020	38	2020
Privacy concerns of the Australian My Health Record: Implications for other large-scale opt-out personal health records PCI Pang, D McKay, S Chang, Q Chen, X Zhang, L Cui Information Processing & Management 57 (6), 102364, 2020	34	2020
Predicting myocardial infarction through retinal scans and minimal personal information A Diaz-Pinto, N Ravikumar, R Attar, A Suinesiaputra, Y Zhao, E Levelt, ... Nature Machine Intelligence 4 (1), 55-61, 2022	31	2022
LitSuggest: a web-based system for literature recommendation and curation using machine learning A Allot, K Lee, Q Chen, L Luo, Z Lu Nucleic acids research 49 (W1), W352-W358, 2021	30	2021

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