Follow
Rory Johnson
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
170462012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
56692012
The GENCODE v7 catalog of human long noncoding RNAs: analysis of their gene structure, evolution, and expression
T Derrien, R Johnson, G Bussotti, A Tanzer, S Djebali, H Tilgner, ...
Genome research 22 (9), 1775-1789, 2012
54292012
GENCODE reference annotation for the human and mouse genomes
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ...
Nucleic acids research 47 (D1), D766-D773, 2019
27802019
Pan-cancer analysis of whole genomes
Nature 578 (7793), 82-93, 2020
1884*2020
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
13532020
The human transcriptome across tissues and individuals
M Melé, PG Ferreira, F Reverter, DS DeLuca, J Monlong, M Sammeth, ...
Science 348 (6235), 660-665, 2015
13432015
GENCODE 2021
A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ...
Nucleic acids research 49 (D1), D916-D923, 2021
9192021
Long non-coding RNAs: definitions, functions, challenges and recommendations
JS Mattick, PP Amaral, P Carninci, S Carpenter, HY Chang, LL Chen, ...
Nature reviews Molecular cell biology 24 (6), 430-447, 2023
7642023
Human long non‐coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors
SY Ng, R Johnson, LW Stanton
The EMBO journal 31 (3), 522-533, 2012
6222012
Towards a complete map of the human long non-coding RNA transcriptome
B Uszczynska-Ratajczak, J Lagarde, A Frankish, R Guigó, R Johnson
Nature Reviews Genetics 19 (9), 535-548, 2018
5552018
Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
E Rheinbay, MM Nielsen, F Abascal, JA Wala, O Shapira, G Tiao, ...
Nature 578 (7793), 102-111, 2020
5462020
Deep sequencing of subcellular RNA fractions shows splicing to be predominantly co-transcriptional in the human genome but inefficient for lncRNAs
H Tilgner, DG Knowles, R Johnson, CA Davis, S Chakrabortty, S Djebali, ...
Genome research 22 (9), 1616-1625, 2012
5382012
A microRNA-based gene dysregulation pathway in Huntington's disease
R Johnson, C Zuccato, ND Belyaev, DJ Guest, E Cattaneo, NJ Buckley
Neurobiology of disease 29 (3), 438-445, 2008
4452008
Long non-coding RNAs in Huntington's disease neurodegeneration
R Johnson
Neurobiology of disease 46 (2), 245-254, 2012
4412012
Genome-wide computational identification and manual annotation of human long noncoding RNA genes
H Jia, M Osak, GK Bogu, LW Stanton, R Johnson, L Lipovich
Rna 16 (8), 1478-1487, 2010
4352010
The RIDL hypothesis: transposable elements as functional domains of long noncoding RNAs
R Johnson, R Guigó
Rna 20 (7), 959-976, 2014
3212014
Genome-wide profiling of the cardiac transcriptome after myocardial infarction identifies novel heart-specific long non-coding RNAs
S Ounzain, R Micheletti, T Beckmann, B Schroen, M Alexanian, I Pezzuto, ...
European heart journal 36 (6), 353-368, 2015
2942015
LncATLAS database for subcellular localization of long noncoding RNAs
D Mas-Ponte, J Carlevaro-Fita, E Palumbo, TH Pulido, R Guigo, ...
Rna 23 (7), 1080-1087, 2017
2922017
Global positioning system: understanding long noncoding RNAs through subcellular localization
J Carlevaro-Fita, R Johnson
Molecular cell 73 (5), 869-883, 2019
2812019
The system can't perform the operation now. Try again later.
Articles 1–20