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Aine Niamh O'Toole
Aine Niamh O'Toole
University of Edinburgh
Verified email at tcd.ie - Homepage
Title
Cited by
Cited by
Year
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
A Rambaut, EC Holmes, O’Toole, V Hill, JT McCrone, C Ruis, ...
Nature microbiology 5 (11), 1403-1407, 2020
23942020
Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity
E Volz, V Hill, JT McCrone, A Price, D Jorgensen, O’Toole, J Southgate, ...
Cell 184 (1), 64-75. e11, 2021
10112021
Assessing transmissibility of SARS-CoV-2 lineage B. 1.1. 7 in England
E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ...
Nature 593 (7858), 266-269, 2021
9712021
Assignment of epidemiological lineages in an emerging pandemic using the pangolin tool
O’Toole, E Scher, A Underwood, B Jackson, V Hill, JT McCrone, ...
Virus evolution 7 (2), veab064, 2021
7462021
Hospital admission and emergency care attendance risk for SARS-CoV-2 delta (B. 1.617. 2) compared with alpha (B. 1.1. 7) variants of concern: a cohort study
KA Twohig, T Nyberg, A Zaidi, S Thelwall, MA Sinnathamby, S Aliabadi, ...
The Lancet Infectious Diseases 22 (1), 35-42, 2022
7092022
Transmission of SARS-CoV-2 Lineage B. 1.1. 7 in England: Insights from linking epidemiological and genetic data
E Volz, S Mishra, M Chand, JC Barrett, R Johnson, L Geidelberg, ...
MedRxiv, 2020.12. 30.20249034, 2021
5972021
Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
EC Thomson, LE Rosen, JG Shepherd, R Spreafico, A da Silva Filipe, ...
Cell 184 (5), 1171-1187. e20, 2021
5262021
Emergence of SARS-CoV-2 omicron lineages BA. 4 and BA. 5 in South Africa
H Tegally, M Moir, J Everatt, M Giovanetti, C Scheepers, E Wilkinson, ...
Nature medicine 28 (9), 1785-1790, 2022
3862022
Recurrent emergence of SARS-CoV-2 spike deletion H69/V70 and its role in the Alpha variant B. 1.1. 7
B Meng, SA Kemp, G Papa, R Datir, IATM Ferreira, S Marelli, WT Harvey, ...
Cell reports 35 (13), 2021
3812021
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
L Du Plessis, JT McCrone, AE Zarebski, V Hill, C Ruis, B Gutierrez, ...
Science 371 (6530), 708-712, 2021
3342021
Changes in symptomatology, reinfection, and transmissibility associated with the SARS-CoV-2 variant B. 1.1. 7: an ecological study
MS Graham, CH Sudre, A May, M Antonelli, B Murray, T Varsavsky, ...
The Lancet Public Health 6 (5), e335-e345, 2021
3172021
Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands
BB Oude Munnink, DF Nieuwenhuijse, M Stein, O’Toole, M Haverkate, ...
Nature medicine 26 (9), 1405-1410, 2020
3132020
COVID-19 in health-care workers in three hospitals in the south of the Netherlands: a cross-sectional study
RS Sikkema, SD Pas, DF Nieuwenhuijse, O'Toole, J Verweij, ...
The Lancet Infectious Diseases 20 (11), 1273-1280, 2020
2762020
Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
E Alm, EK Broberg, T Connor, EB Hodcroft, AB Komissarov, ...
Eurosurveillance 25 (32), 2001410, 2020
2402020
Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic
B Jackson, MF Boni, MJ Bull, A Colleran, RM Colquhoun, AC Darby, ...
Cell 184 (20), 5179-5188. e8, 2021
1682021
Tracking the international spread of SARS-CoV-2 lineages B. 1.1. 7 and B. 1.351/501Y-V2 with grinch
O'Toole, V Hill, OG Pybus, A Watts, II Bogoch, K Khan, JP Messina, ...
Wellcome Open Research 6, 2021
1662021
Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus
C Happi, I Adetifa, P Mbala, R Njouom, E Nakoune, A Happi, N Ndodo, ...
PLoS biology 20 (8), e3001769, 2022
1472022
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research
F Hufsky, K Lamkiewicz, A Almeida, A Aouacheria, C Arighi, A Bateman, ...
Briefings in bioinformatics 22 (2), 642-663, 2021
1312021
Spatiotemporal invasion dynamics of SARS-CoV-2 lineage B. 1.1. 7 emergence
MUG Kraemer, V Hill, C Ruis, S Dellicour, S Bajaj, JT McCrone, G Baele, ...
Science 373 (6557), 889-895, 2021
1252021
Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2
P Lemey, SL Hong, V Hill, G Baele, C Poletto, V Colizza, O’toole, ...
Nature communications 11 (1), 5110, 2020
1232020
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Articles 1–20