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Claire Bertelli
Claire Bertelli
University Hospital Center of Lausanne
Verified email at chuv.ch
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IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
C Bertelli, MR Laird, KP Williams, ...
Nucleic acids research 45 (W1), W30-W35, 2017
1084*2017
EDGAR 2.0: an enhanced software platform for comparative gene content analyses
J Blom, J Kreis, S Spänig, T Juhre, C Bertelli, C Ernst, A Goesmann
Nucleic acids research 44 (W1), W22-W28, 2016
3532016
Genome of Acanthamoeba castellanii highlights extensive lateral gene transfer and early evolution of tyrosine kinase signaling
M Clarke, AJ Lohan, B Liu, I Lagkouvardos, S Roy, N Zafar, C Bertelli, ...
Genome biology 14 (2), 1-15, 2013
3152013
Rapid bacterial genome sequencing: methods and applications in clinical microbiology
C Bertelli, G Greub
Clinical Microbiology and Infection 19 (9), 803-813, 2013
2572013
Lausannevirus, a giant amoebal virus encoding histone doublets
V Thomas, C Bertelli, F Collyn, N Casson, A Telenti, A Goesmann, ...
Environmental microbiology 13 (6), 1454-1466, 2011
1662011
Bifidobacterium longum Bacteremia in Preterm Infants Receiving Probiotics
C Bertelli, T Pillonel, A Torregrossa, G Prod'hom, CJ Fischer, G Greub, ...
Clinical Infectious Diseases 60 (6), 924-927, 2015
1522015
Genotypes Associated with Listeria monocytogenes Isolates Displaying Impaired or Enhanced Tolerances to Cold, Salt, Acid, or Desiccation Stress
P Hingston, J Chen, BK Dhillon, C Laing, C Bertelli, V Gannon, T Tasara, ...
Frontiers in microbiology 8, 369, 2017
1322017
The Waddlia Genome: A Window into Chlamydial Biology
C Bertelli, F Collyn, A Croxatto, C Rückert, A Polkinghorne, ...
PloS one 5 (5), e10890, 2010
1222010
Improved genomic island predictions with IslandPath-DIMOB
C Bertelli, FSL Brinkman
Bioinformatics 1, 7, 2018
1032018
Reduced chlorine in drinking water distribution systems impacts bacterial biodiversity in biofilms
C Bertelli, S Courtois, M Rosikiewicz, P Piriou, S Aeby, S Robert, JF Loret, ...
Frontiers in microbiology 9, 2520, 2018
902018
Microbial genomic island discovery, visualization and analysis
C Bertelli, KE Tilley, FSL Brinkman
Briefings in bioinformatics 20 (5), 1685-1698, 2019
822019
High throughput sequencing and proteomics to identify immunogenic proteins of a new pathogen: the dirty genome approach
G Greub, C Kebbi-Beghdadi, C Bertelli, F Collyn, BM Riederer, C Yersin, ...
PLoS One 4 (12), e8423, 2009
732009
Taxogenomics of the order Chlamydiales.
T Pillonel, C Bertelli, N Salamin, G Greub
International journal of systematic and evolutionary microbiology 65 (Pt 4 …, 2015
702015
Genomic characterisation of an international Pseudomonas aeruginosa reference panel indicates that the two major groups draw upon distinct mobile gene pools
L Freschi, C Bertelli, J Jeukens, MP Moore, I Kukavica-Ibrulj, ...
FEMS microbiology letters 365 (14), fny120, 2018
692018
Lateral gene exchanges shape the genomes of amoeba-resisting microorganisms
C Bertelli, G Greub
Frontiers in cellular and infection microbiology 2, 110, 2012
662012
Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds
R Miyazaki, C Bertelli, P Benaglio, J Canton, N De Coi, WH Gharib, ...
Environmental Microbiology 17 (1), 91-104, 2015
612015
Insight into cross-talk between intra-amoebal pathogens
G Gimenez, C Bertelli, C Moliner, C Robert, D Raoult, PE Fournier, ...
BMC genomics 12, 1-14, 2011
532011
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases
SIB Swiss Institute of Bioinformatics Members
Nucleic acids research 44 (D1), D27-D37, 2016
492016
Comparative genomics of koala, cattle and sheep strains of Chlamydia pecorum
NL Bachmann, TA Fraser, C Bertelli, M Jelocnik, A Gillett, O Funnell, ...
BMC genomics 15, 1-14, 2014
492014
RNA pentaloop structures as effective targets of regulators belonging to the RsmA/CsrA protein family
K Lapouge, R Perozzo, J Iwaszkiewicz, C Bertelli, V Zoete, O Michielin, ...
RNA biology 10 (6), 1030-1041, 2013
482013
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