Ebbe Sloth Andersen

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Morten Muhlig NielsenAssociate Professor of Bioinformatics, Aarhus University HospitalVerified email at clin.au.dk
Flemming BesenbacherProfessor in nanosceince and physics, Aarhus University; Chairman of the Carlsberg FoundationVerified email at inano.au.dk
Cody GearyHeidelberg UniversityVerified email at mr.mpg.de
Victoria BirkedalAarhus UniversityVerified email at inano.au.dk
Jan Skov PedersenProfessor, Aarhus UniversitetVerified email at chem.au.dk
Mingdong DongAarhus UnviersityVerified email at inano.au.dk
Guido GrossiAarhus University, Aarhus (DK)Verified email at inano.au.dk
Paul W.K. RothemundCalifornia Institute of TechnologyVerified email at dna.caltech.edu
Wael MamdouhAmerican University in Cairo (AUC)Verified email at aucegypt.edu
Christian Kroun DamgaardAssociate Professor, Department of Molecular Biology and Genetics, Aarhus UniversityVerified email at mbg.au.dk
Ramesh SubramaniPSGR Krishnammal College for WomenVerified email at psgrkcw.ac.in
Thomas TørringAssociate Professor, Aarhus UniversityVerified email at chem.au.dk
Zsuzsanna Sükösd EtchesLead Bioinformatics Scientist at pipe | bioVerified email at pipebio.com
Abhichart KrissanaprasitNorth Carolina State UniversityVerified email at ncsu.edu
Yossi WeizmannProfessor of Chemistry, Ben-Gurion UniversityVerified email at bgu.ac.il
Mogens KilianProfessor of Medical Microbiology, Aarhus UniversityVerified email at biomed.au.dk
Tore SamuelssonVerified email at medkem.gu.se
Søren PreusFormer Post Doc, Aarhus UniversityVerified email at inano.au.dk
Katrine L. SvanePost Doc, Copenhagen UniversityVerified email at chem.ku.dk
Sonia ConteraProfessor of Biological Physics, University of Oxford, Department of PhysicsVerified email at physics.ox.ac.uk

Ebbe Sloth Andersen

Associate Professor, Aarhus University

Verified email at inano.au.dk - Homepage

Biomolecular structure folding self-assembly design


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Self-assembly of a nanoscale DNA box with a controllable lid ES Andersen, M Dong, MM Nielsen, K Jahn, R Subramani, W Mamdouh, ... Nature 459 (7243), 73-76, 2009	1839	2009
A single-stranded architecture for cotranscriptional folding of RNA nanostructures C Geary, PWK Rothemund, ES Andersen Science 345 (6198), 799-804, 2014	383	2014
DNA origami design of dolphin-shaped structures with flexible tails ES Andersen, M Dong, MM Nielsen, K Jahn, A Lind-Thomsen, ... ACS nano 2 (6), 1213-1218, 2008	353	2008
Control of enzyme reactions by a reconfigurable DNA nanovault G Grossi, M Dalgaard Ebbesen Jepsen, J Kjems, ES Andersen Nature communications 8 (1), 992, 2017	190	2017
Construction of a 4 zeptoliters switchable 3D DNA box origami RM Zadegan, MDE Jepsen, KE Thomsen, AH Okholm, DH Schaffert, ... ACS nano 6 (11), 10050-10053, 2012	160	2012
RNA interactions in the 5′ region of the HIV-1 genome CK Damgaard, ES Andersen, B Knudsen, J Gorodkin, J Kjems Journal of molecular biology 336 (2), 369-379, 2004	154	2004
Development of a genetically encodable FRET system using fluorescent RNA aptamers MDE Jepsen, SM Sparvath, TB Nielsen, AH Langvad, G Grossi, ... Nature communications 9 (1), 18, 2018	143	2018
The tmRDB and SRPDB resources ES Andersen, MA Rosenblad, N Larsen, JC Westergaard, J Burks, ... Nucleic acids research 34 (suppl_1), D163-D168, 2006	135	2006
A visual review of the human pathogen Streptococcus pneumoniae DH Engholm, M Kilian, DS Goodsell, ES Andersen, RS Kjærgaard FEMS microbiology reviews 41 (6), 854-879, 2017	120	2017
Multifluorophore DNA origami beacon as a biosensing platform D Selnihhin, SM Sparvath, S Preus, V Birkedal, ES Andersen Acs Nano 12 (6), 5699-5708, 2018	115	2018
Role of the trans-activation response element in dimerization of HIV-1 RNA ES Andersen, SA Contera, B Knudsen, CK Damgaard, F Besenbacher, ... Journal of Biological Chemistry 279 (21), 22243-22249, 2004	98	2004
RNA origami design tools enable cotranscriptional folding of kilobase-sized nanoscaffolds C Geary, G Grossi, EKS McRae, PWK Rothemund, ES Andersen Nature chemistry 13 (6), 549-558, 2021	82	2021
Dimerization and template switching in the 5′ untranslated region between various subtypes of human immunodeficiency virus type 1 ES Andersen, RE Jeeninga, CK Damgaard, B Berkhout, J Kjems Journal of virology 77 (5), 3020-3030, 2003	63	2003
Branched kissing loops for the construction of diverse RNA homooligomeric nanostructures D Liu, CW Geary, G Chen, Y Shao, M Li, C Mao, ES Andersen, JA Piccirilli, ... Nature Chemistry 12 (3), 249-259, 2020	59	2020
Semiautomated improvement of RNA alignments ES Andersen, A Lind-Thomsen, B Knudsen, SE Kristensen, JH Havgaard, ... Rna 13 (11), 1850-1859, 2007	54	2007
Prediction and design of DNA and RNA structures ES Andersen New biotechnology 27 (3), 184-193, 2010	52	2010
Genetically encoded, functional single‐strand RNA origami: anticoagulant A Krissanaprasit, C Key, M Fergione, K Froehlich, S Pontula, M Hart, ... Advanced Materials 31 (21), 1808262, 2019	50	2019
Multithreaded comparative RNA secondary structure prediction using stochastic context-free grammars Z Sükösd, B Knudsen, M Værum, J Kjems, ES Andersen BMC bioinformatics 12, 1-8, 2011	49	2011
Functional patterning of DNA origami by parallel enzymatic modification K Jahn, T Tørring, NV Voigt, RS Sørensen, AL Bank Kodal, ES Andersen, ... Bioconjugate chemistry 22 (4), 819-823, 2011	49	2011
Full-length RNA structure prediction of the HIV-1 genome reveals a conserved core domain Z Sükösd, ES Andersen, SE Seemann, MK Jensen, M Hansen, ... Nucleic acids research 43 (21), 10168-10179, 2015	41	2015

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