| RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look R Rangan, IN Zheludev, RJ Hagey, EA Pham, HK Wayment-Steele, ... Rna 26 (8), 937-959, 2020 | 276 | 2020 |
| Surface and stability characterization of a nanoporous ZIF-8 thin film F Tian, AM Cerro, AM Mosier, HK Wayment-Steele, RS Shine, A Park, ... The Journal of Physical Chemistry C 118 (26), 14449-14456, 2014 | 225 | 2014 |
| Variational encoding of complex dynamics CX Hernández, HK Wayment-Steele, MM Sultan, BE Husic, VS Pande Physical Review E 97 (6), 062412, 2018 | 182 | 2018 |
| Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics K Leppek, GW Byeon, W Kladwang, HK Wayment-Steele, CH Kerr, AF Xu, ... Nature communications 13 (1), 1536, 2022 | 172 | 2022 |
| Predicting multiple conformations via sequence clustering and AlphaFold2 HK Wayment-Steele, A Ojoawo, R Otten, JM Apitz, W Pitsawong, ... Nature 625 (7996), 832-839, 2024 | 122 | 2024 |
| Transferable neural networks for enhanced sampling of protein dynamics MM Sultan, HK Wayment-Steele, VS Pande Journal of chemical theory and computation 14 (4), 1887-1894, 2018 | 118 | 2018 |
| Theoretical basis for stabilizing messenger RNA through secondary structure design HK Wayment-Steele, DS Kim, CA Choe, JJ Nicol, R Wellington-Oguri, ... Nucleic acids research 49 (18), 10604-10617, 2021 | 112 | 2021 |
| RNA secondary structure packages evaluated and improved by high-throughput experiments HK Wayment-Steele, W Kladwang, AI Strom, J Lee, A Treuille, A Becka, ... Nature methods 19 (10), 1234-1242, 2022 | 66 | 2022 |
| Prediction of multiple conformational states by combining sequence clustering with AlphaFold2 HK Wayment-Steele, S Ovchinnikov, L Colwell, D Kern BioRxiv, 2022.10. 17.512570, 2022 | 57 | 2022 |
| A modular DNA scaffold to study protein–protein interactions at single-molecule resolution D Kostrz, HK Wayment-Steele, JL Wang, M Follenfant, VS Pande, ... Nature nanotechnology 14 (10), 988-993, 2019 | 44 | 2019 |
| Deep learning models for predicting RNA degradation via dual crowdsourcing HK Wayment-Steele, W Kladwang, AM Watkins, DS Kim, B Tunguz, ... Nature Machine Intelligence 4 (12), 1174-1184, 2022 | 25 | 2022 |
| Crowdsourced RNA design discovers diverse, reversible, efficient, self-contained molecular switches JOL Andreasson, MR Gotrik, MJ Wu, HK Wayment-Steele, W Kladwang, ... Proceedings of the National Academy of Sciences 119 (18), e2112979119, 2022 | 25 | 2022 |
| Monitoring N3 Dye Adsorption and Desorption on TiO2 Surfaces: A Combined QCM-D and XPS Study HK Wayment-Steele, LE Johnson, F Tian, MC Dixon, L Benz, MS Johal ACS applied materials & interfaces 6 (12), 9093-9099, 2014 | 25 | 2014 |
| A minimum variance clustering approach produces robust and interpretable coarse-grained models BE Husic, KA McKiernan, HK Wayment-Steele, MM Sultan, VS Pande Journal of chemical theory and computation 14 (2), 1071-1082, 2018 | 23 | 2018 |
| Investigating the role of boundary bricks in DNA brick self-assembly HK Wayment-Steele, D Frenkel, A Reinhardt Soft Matter 13 (8), 1670-1680, 2017 | 13 | 2017 |
| Redesigning the EteRNA100 for the Vienna 2 folding engine RV Koodli, B Rudolfs, HK Wayment-Steele, Eterna Structure Designers, ... BioRxiv, 2021.08. 26.457839, 2021 | 12 | 2021 |
| Evaluating riboswitch optimality H Wayment-Steele, M Wu, M Gotrik, R Das Methods in enzymology 623, 417-450, 2019 | 11 | 2019 |
| Note: Variational encoding of protein dynamics benefits from maximizing latent autocorrelation HK Wayment-Steele, VS Pande The Journal of chemical physics 149 (21), 2018 | 9 | 2018 |
| Monitoring of single and double lipid membrane formation with high spatiotemporal resolution using evanescent light scattering microscopy B Agnarsson, HK Wayment-Steele, F Höök, A Kunze Nanoscale 8 (46), 19219-19223, 2016 | 9 | 2016 |
| Protein language models learn evolutionary statistics of interacting sequence motifs Z Zhang, HK Wayment-Steele, G Brixi, H Wang, M Dal Peraro, D Kern, ... bioRxiv, 2024.01. 30.577970, 2024 | 6 | 2024 |
Rhiju DasHHMI & Stanford UniversityVerified email at stanford.edu
