Pritha Ghosh

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Janusz BujnickiProfessor of Biology, International Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Nithin CAssistant Professor (adiunkt), Biological and Chemical Research Centre, Department of ChemistryVerified email at cnbc.uw.edu.pl
Ramanathan SowdhaminiProfessor, National Centre for Biological SciencesVerified email at ncbs.res.in
Venky SoundararajanFounder & Chief Scientific Officer - nference, Anumana, Pramana, VimanaVerified email at nference.net
AJ VenkatakrishnanStanford UniversityVerified email at stanford.edu
Tomasz Krzysztof WireckiPostdoctoral Researcher, Institute of Molecular and Cell Biology in WarsawVerified email at iimcb.gov.pl
Rohit Suratekarnference LabsVerified email at nference.net
Praveen AnandPostdoctoral Fellow, Harvard University/ Campus Fellow inStem,NCBSVerified email at fas.harvard.edu
Michiel NiesennferenceVerified email at nference.net
Danny IncarnatoAssistant Professor, University of GroningenVerified email at rug.nl
Patrick J. LenehanMedical Student, Harvard Medical SchoolVerified email at uconn.edu
OOMMEN K MATHEW (Oommen K M)...MedGenome Labs Pvt. Ltd.Verified email at medgenome.com
John C. OHoroMayo Clinic Division of Public Health, Infectious Diseases and Occupational MedicineVerified email at mayo.edu
Ryan T. HurtProfessor of Medicine, Mayo ClinicVerified email at mayo.edu
Sunandan MukherjeeInternational Institute of Molecular and Cell Biology in Warsaw, PolandVerified email at iimcb.gov.pl
Travis HughesDigitalis VenturesVerified email at digitalisventures.com
Snehal D. KarpePostdoctoral fellow, Institute Jules Bordet (Brussels) and GIGA (Liege)Verified email at ulb.ac.be
Shaik Naseer PashaSenior Scientist, Avesthagen LimitedVerified email at avesthagen.com
Sajeevan Radha SivarajanResearcher, Department of Plant Protection Biology, SLU - AlnarpVerified email at slu.se
Mahantesha B.N. Naika, PhD, PDF(N...Assistant Professor, University of Horticultural Sciences, IndiaVerified email at uhsbagalkot.edu.in

Pritha Ghosh

Senior Clinical Scientist, ConcertAI

Verified email at concertai.com - Homepage

Bioinformatics


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Genome-wide mapping of SARS-CoV-2 RNA structures identifies therapeutically-relevant elements I Manfredonia, C Nithin, A Ponce-Salvatierra, P Ghosh, TK Wirecki, ... Nucleic acids research 48 (22), 12436-12452, 2020	219*	2020
Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties AK Upadhyay, AR Chacko, A Gandhimathi, P Ghosh, K Harini, AP Joseph, ... BMC plant biology 15 (1), 1-20, 2015	110	2015
Bioinformatics Tools and Benchmarks for Computational Docking and 3D Structure Prediction of RNA-Protein Complexes C Nithin, P Ghosh, JM Bujnicki Genes 9 (9), 432, 2018	44	2018
Computational modeling of RNA 3D structure based on experimental data A Ponce-Salvatierra, KM Astha, C Nithin, P Ghosh, S Mukherjee, ... Bioscience reports 39 (2), 2019	40	2019
Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition P Kumari, F Aeschimann, D Gaidatzis, JJ Keusch, P Ghosh, A Neagu, ... Nature Communications 9 (1), 1549, 2018	39	2018
COVID-19 vaccines dampen genomic diversity of SARS-CoV-2: Unvaccinated patients exhibit more antigenic mutational variance MJM Niesen, P Anand, E Silvert, R Suratekar, C Pawlowski, P Ghosh, ... MedRxiv, 2021.07. 01.21259833, 2021	31	2021
The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera) SN Pasha, KM Shafi, AG Joshi, I Meenakshi, K Harini, J Mahita, ... Genomics, 2019	27	2019
Expanding repertoire of SARS-CoV-2 deletion mutations contributes to evolution of highly transmissible variants AJ Venkatakrishnan, P Anand, PJ Lenehan, P Ghosh, R Suratekar, ... Scientific Reports 13 (1), 257, 2023	26*	2023
High diversity in Delta variant across countries revealed by genome-wide analysis of SARS-CoV-2 beyond the Spike protein R Suratekar, P Ghosh, MJM Niesen, G Donadio, P Anand, ... Molecular Systems Biology 18 (2), e10673, 2022	26	2022
Genome-wide survey of putative RNA-binding proteins encoded in the human proteome P Ghosh, R Sowdhamini Molecular BioSystems 12 (2), 532-540, 2016	19	2016
Exploring the medicinally important secondary metabolites landscape through the lens of transcriptome data in fenugreek (Trigonella foenum graecum L.) MBN Naika, N Sathyanarayanan, RS Sajeevan, T Bhattacharyya, ... Scientific Reports 12 (1), 13534, 2022	17	2022
Computational pipeline for reference-free comparative analysis of RNA 3D structures applied to SARS-CoV-2 UTR models J Gumna, M Antczak, RW Adamiak, JM Bujnicki, SJ Chen, F Ding, ... International journal of molecular sciences 23 (17), 9630, 2022	12*	2022
RStrucFam: a web server to associate structure and cognate RNA for RNA-binding proteins from sequence information P Ghosh, OK Mathew, R Sowdhamini BMC bioinformatics 17 (1), 1-8, 2016	9	2016
hRBPome: a central repository of all known human RNA-binding proteins P Ghosh, P Murugavel, R Sowdhamini bioRxiv, 269043, 2018	8	2018
Dataset for the combined transcriptome assembly of M. oleifera and functional annotation KM Shafi, AG Joshi, I Meenakshi, SN Pasha, K Harini, J Mahita, ... Data in brief 30, 105416, 2020	5	2020
A tale of two paralogs: human Transformer2 proteins with differential RNA-binding affinities P Ghosh, SN Grellscheid, R Sowdhamini Journal of Biomolecular Structure and Dynamics 34 (9), 1979-1986, 2016	5	2016
PASS2 database for the structure-based sequence alignment of distantly related SCOP domain superfamilies: update to version 5 and added features A Gandhimathi, P Ghosh, S Hariharaputran, OK Mathew, R Sowdhamini Nucleic acids research 44 (D1), D410-D414, 2016	5	2016
Severe acute infection and chronic pulmonary disease are risk factors for developing post-COVID-19 conditions P Ghosh, MJM Niesen, C Pawlowski, H Bandi, U Yoo, PJ Lenehan, ... medRxiv, 2022	4	2022
Molecular insights into RNA recognition and gene regulation by the TRIM-NHL protein Mei-P26 A Salerno-Kochan, A Horn, P Ghosh, C Nithin, A Kościelniak, A Meindl, ... Life Science Alliance 5 (8), 2022	3	2022
Continuous genomic diversification of long polynucleotide fragments drives the emergence of new SARS-CoV-2 variants of concern K Murugadoss, MJM Niesen, B Raghunathan, PJ Lenehan, P Ghosh, ... PNAS Nexus 1 (1), pgac018, 2022	3	2022

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