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Sophia Rudorf
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Cited by
Year
Protein synthesis in E. coli: dependence of codon-specific elongation on tRNA concentration and codon usage
S Rudorf, R Lipowsky
PloS one 10 (8), e0134994, 2015
622015
Deducing the Kinetics of Protein Synthesis In Vivo from the Transition Rates Measured In Vitro
S Rudorf, M Thommen, MV Rodnina, R Lipowsky
PLoS computational biology 10 (10), e1003909, 2014
612014
Optimizing the dynamics of protein expression
JH Trösemeier, S Rudorf, H Loessner, B Hofner, A Reuter, T Schulenborg, ...
Scientific reports 9 (1), 7511, 2019
392019
Self-assembly of stable monomolecular nucleic acid lipid particles with a size of 30 nm
S Rudorf, JO Rädler
Journal of the American Chemical Society 134 (28), 11652-11658, 2012
232012
Programming multi-protein assembly by gene-brush patterns and two-dimensional compartment geometry
O Vonshak, Y Divon, S Förste, D Garenne, V Noireaux, R Lipowsky, ...
Nature Nanotechnology 15 (9), 783-791, 2020
172020
Transient phenomena in gene expression after induction of transcription
C Deneke, S Rudorf, A Valleriani
PLoS One 7 (4), e35044, 2012
172012
Efficiency of protein synthesis inhibition depends on tRNA and codon compositions
S Rudorf
PLOS Computational Biology, 2019
112019
Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis
N Haase, W Holtkamp, R Lipowsky, M Rodnina, S Rudorf
Nucleic acids research 46 (22), e130-e130, 2018
112018
Utilizing high‐resolution ribosome profiling for the global investigation of gene expression in Chlamydomonas
VL Gotsmann, MKY Ting, N Haase, S Rudorf, R Zoschke, F Willmund
The Plant Journal 117 (5), 1614-1634, 2024
12024
Protein synthesis by ribosomes
S Rudorf
Universität Potsdam Potsdam, 2015
12015
Decomposing bulk signals to reveal hidden information in processive enzyme reactions: A case study in mRNA translation
N Haase, W Holtkamp, S Christ, D Heinemann, MV Rodnina, S Rudorf
PLOS Computational Biology 20 (3), e1011918, 2024
2024
Codon optimization
R Lipowsky, S Rudorf, H Lossner, JH Trosemeier, I Koch, C Kamp
US Patent 11,848,074, 2023
2023
Computational analysis of protein synthesis, diffusion, and binding in compartmental biochips
S Förste, O Vonshak, SS Daube, RH Bar-Ziv, R Lipowsky, S Rudorf
Microbial Cell Factories 22 (1), 244, 2023
2023
Dominance analysis of competing protein assembly pathways
J Lankeit, S Förste, S Rudorf
Plos one 18 (2), e0281964, 2023
2023
Tailoring Codon Usage to the Underlying Biology for Protein Expression Optimization
Z Alirezaeizanjani, JH Trösemeier, C Kamp, S Rudorf
Insoluble Proteins: Methods and Protocols, 85-92, 2022
2022
Modellentwicklung und maschinelles Lernen erhöhen die Proteinausbeute
JH Trösemeier, S Rudorf, H Lößner, B Hofner, C Kamp
BIOspektrum 26, 262-264, 2020
2020
Optimizing the dynamics of protein expression (vol 9, 7511, 2019)
JH Trosemeier, S Rudorf, H Loessner, B Hofner, A Reuter, T Schulenborg, ...
SCIENTIFIC REPORTS 10 (1), 2020
2020
Publisher Correction: Optimizing the dynamics of protein expression
JH Trösemeier, S Rudorf, H Loessner, B Hofner, A Reuter, T Schulenborg, ...
Scientific reports 10, 2020
2020
Studying the Nascent Peptide Chain in the Ribosomal Exit Tunnel
N Haase, W Holtkamp, R Lipowsky, M Rodnina, S Rudorf
Biophysical Journal 114 (3), 595a, 2018
2018
Protein Synthesis by Ribosomes: Mapping In Vitro onto In Vivo Rates
S Rudorf, M Thommen, MV Rodnina, R Lipowsky
Biophysical Journal 106 (2), 240a, 2014
2014
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Articles 1–20