Bjoern Schwalb
Bjoern Schwalb
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Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast
C Miller, B Schwalb, K Maier, D Schulz, S Dümcke, B Zacher, A Mayer, ...
Molecular systems biology 7 (1), 458, 2011
TT-seq maps the human transient transcriptome
B Schwalb, M Michel, B Zacher, K Frühauf, C Demel, A Tresch, J Gagneur, ...
Science 352 (6290), 1225-1228, 2016
Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation
M Sun, B Schwalb, D Schulz, N Pirkl, S Etzold, L Larivière, KC Maier, ...
Genome research 22 (7), 1350-1359, 2012
Fine mapping of genome activation in bovine embryos by RNA sequencing
A Graf, S Krebs, V Zakhartchenko, B Schwalb, H Blum, E Wolf
Proceedings of the National Academy of Sciences 111 (11), 4139-4144, 2014
Transcriptome surveillance by selective termination of noncoding RNA synthesis
D Schulz, B Schwalb, A Kiesel, C Baejen, P Torkler, J Gagneur, J Soeding, ...
Cell 155 (5), 1075-1087, 2013
Global analysis of eukaryotic mRNA degradation reveals Xrn1-dependent buffering of transcript levels
M Sun, B Schwalb, N Pirkl, KC Maier, A Schenk, H Failmezger, A Tresch, ...
Molecular cell 52 (1), 52-62, 2013
CDK9-dependent RNA polymerase II pausing controls transcription initiation
S Gressel, B Schwalb, TM Decker, W Qin, H Leonhardt, D Eick, P Cramer
Elife 6, e29736, 2017
The implication of early chromatin changes in X chromosome inactivation
JJ Żylicz, A Bousard, K Žumer, F Dossin, E Mohammad, ST da Rocha, ...
Cell 176 (1-2), 182-197. e23, 2019
Genome-wide analysis of RNA polymerase II termination at protein-coding genes
C Baejen, J Andreani, P Torkler, S Battaglia, B Schwalb, M Lidschreiber, ...
Molecular cell 66 (1), 38-49. e6, 2017
Periodic mRNA synthesis and degradation co‐operate during cell cycle gene expression
P Eser, C Demel, KC Maier, B Schwalb, N Pirkl, DE Martin, P Cramer, ...
Molecular systems biology 10 (1), 717, 2014
Architecture of the RNA polymerase II-Paf1C-TFIIS transcription elongation complex
Y Xu, C Bernecky, CT Lee, KC Maier, B Schwalb, D Tegunov, JM Plitzko, ...
Nature communications 8 (1), 1-13, 2017
Accurate promoter and enhancer identification in 127 ENCODE and roadmap epigenomics cell types and tissues by GenoSTAN
B Zacher, M Michel, B Schwalb, P Cramer, A Tresch, J Gagneur
PloS one 12 (1), e0169249, 2017
Drosophila miR-277 controls branched-chain amino acid catabolism and affects lifespan
SM Esslinger, B Schwalb, S Helfer, KM Michalik, H Witte, KC Maier, ...
RNA biology 10 (6), 1042-1056, 2013
Promoter distortion and opening in the RNA polymerase II cleft
C Dienemann, B Schwalb, S Schilbach, P Cramer
Molecular cell 73 (1), 97-106. e4, 2019
Mediator phosphorylation prevents stress response transcription during non-stress conditions
C Miller, I Matic, KC Maier, B Schwalb, S Roether, K Strässer, A Tresch, ...
Journal of Biological Chemistry 287 (53), 44017-44026, 2012
The pause-initiation limit restricts transcription activation in human cells
S Gressel, B Schwalb, P Cramer
Nature communications 10 (1), 1-12, 2019
TT‐seq captures enhancer landscapes immediately after T‐cell stimulation
M Michel, C Demel, B Zacher, B Schwalb, S Krebs, H Blum, J Gagneur, ...
Molecular systems biology 13 (3), 920, 2017
Measurement of genome-wide RNA synthesis and decay rates with Dynamic Transcriptome Analysis (DTA)
B Schwalb, D Schulz, M Sun, B Zacher, S Dümcke, DE Martin, P Cramer, ...
Bioinformatics 28 (6), 884-885, 2012
Selective Mediator dependence of cell-type-specifying transcription
MG Jaeger, B Schwalb, SD Mackowiak, T Velychko, A Hanzl, H Imrichova, ...
Nature genetics 52 (7), 719-727, 2020
LSD: Lots of superior depictions
B Schwalb, A Tresch, P Torkler, S Duemcke, C Demel, B Ripley, ...
The Comprehensive R Archive Network, 2011
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