| The histone mark H3K36me2 recruits DNMT3A and shapes the intergenic DNA methylation landscape DN Weinberg, S Papillon-Cavanagh, H Chen, Y Yue, X Chen, ... Nature 573 (7773), 281-286, 2019 | 457 | 2019 |
| H3K27M induces defective chromatin spread of PRC2-mediated repressive H3K27me2/me3 and is essential for glioma tumorigenesis AS Harutyunyan, B Krug, H Chen, S Papillon-Cavanagh, M Zeinieh, ... Nature communications 10 (1), 1262, 2019 | 303 | 2019 |
| H3K27M in gliomas causes a one-step decrease in H3K27 methylation and reduced spreading within the constraints of H3K36 methylation AS Harutyunyan, H Chen, T Lu, C Horth, H Nikbakht, B Krug, C Russo, ... Cell reports 33 (7), 2020 | 62 | 2020 |
| A new palm vein matching method based on ICP algorithm H Chen, G Lu, R Wang Proceedings of the 2nd International Conference on Interaction Sciences …, 2009 | 57 | 2009 |
| Single-cell transcriptional analysis to uncover regulatory circuits driving cell fate decisions in early mouse development H Chen, J Guo, SK Mishra, P Robson, M Niranjan, J Zheng Bioinformatics 31 (7), 1060-1066, 2015 | 55 | 2015 |
| The max-min high-order dynamic Bayesian network for learning gene regulatory networks with time-delayed regulations Y Li, H Chen, J Zheng, A Ngom IEEE/ACM transactions on computational biology and bioinformatics 13 (4 …, 2015 | 53 | 2015 |
| Depletion of H3K36me2 recapitulates epigenomic and phenotypic changes induced by the H3.3K36M oncohistone mutation CL Kartik N. Rajagopalan, Xiao Chen, Daniel N. Weinberg, Haifen Chen, Jacek ... PNAS 118 (9), e2021795118, 2021 | 40* | 2021 |
| H3K36 dimethylation shapes the epigenetic interaction landscape by directing repressive chromatin modifications in embryonic stem cells H Chen, B Hu, C Horth, E Bareke, P Rosenbaum, SY Kwon, J Sirois, ... Genome research 32 (5), 825-837, 2022 | 30 | 2022 |
| Genome-wide analysis in Plasmodium falciparum reveals early and late phases of RNA polymerase II occupancy during the infectious cycle R Rai, L Zhu, H Chen, AP Gupta, SK Sze, J Zheng, C Ruedl, Z Bozdech, ... BMC genomics 15, 1-19, 2014 | 27 | 2014 |
| Rules of co-occurring mutations characterize the antigenic evolution of human influenza A/H3N2, A/H1N1 and B viruses H Chen, X Zhou, J Zheng, CK Kwoh BMC Medical Genomics 9 (Suppl 3), 69, 2016 | 21 | 2016 |
| Integrating epigenetic prior in dynamic bayesian network for gene regulatory network inference H Chen, DAK Maduranga, PA Mundra, J Zheng 2013 IEEE Symposium on Computational Intelligence in Bioinformatics and …, 2013 | 21 | 2013 |
| Highly sensitive inference of time-delayed gene regulation by network deconvolution H Chen, PA Mundra, LN Zhao, F Lin, J Zheng BMC systems biology 8, 1-10, 2014 | 17 | 2014 |
| Bayesian data fusion of gene expression and histone modification profiles for inference of gene regulatory network H Chen, DAK Maduranga, PA Mundra, J Zheng IEEE/ACM Transactions on Computational Biology and Bioinformatics 17 (2 …, 2018 | 8 | 2018 |
| Deciphering histone code of transcriptional regulation in malaria parasites by large-scale data mining H Chen, S Lonardi, J Zheng Computational Biology and Chemistry 50, 3-10, 2014 | 7 | 2014 |
| TULIPs decorate the three-dimensional genome of PFA ependymoma MJ Johnston, JJY Lee, B Hu, A Nikolic, E Hasheminasabgorji, A Baguette, ... Cell 187 (18), 4926-4945. e22, 2024 | 3 | 2024 |
| An effective feature extraction method used in breath analysis H Chen, G Lu, D Guo, D Zhang Medical Biometrics: Second International Conference, ICMB 2010, Hong Kong …, 2010 | 1 | 2010 |
| H3K27me3 spreading organizes canonical PRC1 chromatin architecture to regulate developmental programs B Krug, B Hu, H Chen, A Ptack, X Chen, KH Gretarsson, S Deshmukh, ... bioRxiv, 2023.11. 28.567931, 2023 | | 2023 |
| Abstract B44: Identification of epigenomic changes induced by H3 K27M mutation in glioblastoma using patient-derived and CRISPR/Cas9 edited cell lines AS Harutyunyan, B Krug, S Papillon-Cavanagh, H Chen, S Deshmukh, ... Cancer Research 78 (19_Supplement), B44-B44, 2018 | | 2018 |
| Identification of epigenomic changes induced by H3 K27M mutation in glioblastoma using patient-derived and CRISPR/Cas9 edited cell lines AS Harutyunyan, B Krug, S Papillon-Cavanagh, H Chen, S Deshmukh, ... CANCER RESEARCH 78 (19), 2018 | | 2018 |
Jie ZhengAssociate Professor, School of Information Science and Technology, ShanghaiTech UniversityVerified email at shanghaitech.edu.cn
