Sandip Kumar
Sandip Kumar
Research Associate, University of Oxford
Verified email at udel.edu - Homepage
Title
Cited by
Cited by
Year
Quantitation of the DNA tethering effect in long-range DNA looping in vivo and in vitro using the Lac and λ repressors
DG Priest, L Cui, S Kumar, DD Dunlap, IB Dodd, KE Shearwin
Proceedings of the National Academy of Sciences 111 (1), 349-354, 2014
352014
Direct Imaging of Protein Organization in an Intact Bacterial Organelle Using High-Resolution Atomic Force Microscopy
S Kumar, ML Cartron, N Mullin, P Qian, GJ Leggett, CN Hunter, JK Hobbs
ACS nano 11 (1), 126, 2017
302017
Covalent attachment of shape-restricted DNA molecules on amine-functionalized Si (111) surface
X Zhang, S Kumar, J Chen, AV Teplyakov
Surface Science 603 (16), 2445-2457, 2009
282009
Enhanced Tethered-Particle Motion Analysis Reveals Viscous Effects
S Kumar, C Manzo, C Zurla, S Ucuncuoglu, L Finzi, D Dunlap
Biophysical Journal 106 (2), 399-409, 2014
272014
Quantitation of interactions between two DNA loops demonstrates loop domain insulation in E. coli cells
DG Priest, S Kumar, Y Yan, DD Dunlap, IB Dodd, KE Shearwin
Proceedings of the National Academy of Sciences 111 (42), E4449-E4457, 2014
152014
The architecture of the Gram-positive bacterial cell wall
L Pasquina-Lemonche, J Burns, RD Turner, S Kumar, R Tank, N Mullin, ...
Nature, 1-4, 2020
142020
O-antigen-dependent colicin insensitivity of uropathogenic Escherichia coli
C Sharp, C Boinett, A Cain, NG Housden, S Kumar, K Turner, J Parkhill, ...
Journal of bacteriology 201 (4), 2019
142019
Tuning the geometry of shape-restricted DNA molecules on the functionalized Si (111)
X Zhang, IH Antonopoulos, S Kumar, J Chen, AV Teplyakov
Applied Surface Science 256 (3), 815-818, 2009
142009
Lac Repressor Mediated DNA Looping: Monte Carlo Simulation of Constrained DNA Molecules Complemented with Current Experimental Results
YY Biton, S Kumar, D Dunlap, D Swigon
PloS one 9 (5), e92475, 2014
62014
Heterology tolerance and recognition of mismatched base pairs by human Rad51 protein
YC Tsai, Y Wang, DE Urena, S Kumar, J Chen
DNA repair 10 (4), 363-372, 2011
42011
Analysis of long dsRNA produced in vitro and in vivo using atomic force microscopy in conjunction with ion-pair reverse-phase HPLC
AO Nwokeoji, S Kumar, PM Kilby, DE Portwood, JK Hobbs, MJ Dickman
Analyst 144 (16), 4985-4994, 2019
32019
Cell wall architecture and the development of cell shape in S. aureus and E. coli
JK Hobbs, JM Burns, RD Turner, RG Bailey, S Kumar, RK Tank, N Mullin, ...
European Biophysics Journal with Biophysics Letters 46 (Suppl 1), S100-S100, 2017
2017
Death or alive? Correlating the cell wall structure of sacculi and living bacteria using AFM
LP Lemonche, S Kumar, RD Turner, JM Burns, N Mullin, RK Tank, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S295-S295, 2017
2017
High-resolution Atomic Force Microscopy (AFM) imaging of native biological membrane systems
S Kumar, N Mullin, ML Cartron, GJ Leggett, SJ Foster, CN Hunter, ...
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S368-S368, 2017
2017
High resolution atomic force microscopy of living S. aureus bacterial cell wall
JM Burns, RG Bailey, S Kumar, RD Turner, N Mullin, SJ Foster, JK Hobbs
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS 46, S291-S291, 2017
2017
The Effect of HU Protein on Lac-Repressor-Mediated DNA Looping
Y Yan, S Kumar, L Finzi, DD Dunlap
Biophysical Journal 108 (2), 74a-75a, 2015
2015
Estimation of DNA Loop Interactions Supports the Loop Domain Model of Insulator Action
S Kumar, DG Priest, Y Yan, IB Dodd, KE Shearwin, DD Dunlap
Biophysical Journal 108 (2), 164a, 2015
2015
In Silico, In Vitro, and In Vivo Estimation of J-Factors for LAC Repressor-Mediated DNA Loop Formation
S Kumar, D Priest, Y Biton, D Swigon, K Shearwin, I Dodd, D Dunlap
Biophysical Journal 104 (2), 174a-175a, 2013
2013
Effects of Viscosity on Tethered Particle Motion (TPM) Experiments
S Kumar, C Zurla, S Goyal, L Finzi, D Dunlap
Biophysical Journal 102 (3), 383a-384a, 2012
2012
COLL 150-Covalent attachment of shape-restricted thiol-DNA to an amine-terminated self-assembled monolayer on silicon
Y Antonopoulos, X Zhang, S Kumar, AV Teplyakov
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 236, 2008
2008
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Articles 1–20