Third-generation sequencing and the future of genomics H Lee, J Gurtowski, S Yoo, M Nattestad, S Marcus, S Goodwin, ... BioRxiv, 048603, 2016 | 149 | 2016 |
SplitMEM: a graphical algorithm for pan-genome analysis with suffix skips S Marcus, H Lee, MC Schatz Bioinformatics 30 (24), 3476-3483, 2014 | 119 | 2014 |
Error correction and assembly complexity of single molecule sequencing reads H Lee, J Gurtowski, S Yoo, S Marcus, WR McCombie, M Schatz BioRxiv, 006395, 2014 | 112 | 2014 |
Third-generation sequencing and the future of genomics. bioRxiv 048603 H Lee, J Gurtowski, S Yoo, M Nattestad, S Marcus, S Goodwin, ... | 18 | 2016 |
Succinct 2D dictionary matching S Neuburger, D Sokol Algorithmica 65, 662-684, 2013 | 14 | 2013 |
Two-dimensional maximal repetitions A Amir, GM Landau, S Marcus, D Sokol Theoretical Computer Science 812, 49-61, 2020 | 11 | 2020 |
Gene space and transcriptome assemblies of leafy spurge (Euphorbia esula) identify promoter sequences, repetitive elements, high-quality markers, and a full-length chloroplast … DP Horvath, S Patel, M Doğramaci, WS Chao, JV Anderson, ME Foley, ... Weed Science 66 (3), 355-367, 2018 | 10 | 2018 |
2D Lyndon words and applications S Marcus, D Sokol Algorithmica 77, 116-133, 2017 | 10 | 2017 |
Third-generation sequencing and the future of genomics. bioRxiv: 48603 H Lee, J Gurtowski, S Yoo, M Nattestad, S Marcus, S Goodwin, ... | 6 | 2016 |
Error correction and assembly complexity of single molecule sequencing reads. bioRxiv 006395 H Lee, J Gurtowski, S Yoo, S Marcus, WR McCombie, M Schatz DOI: https://10.1101/006395, 2014 | 6 | 2014 |
Pattern matching algorithms: An overview S Neuburger Department of Computer Science, The Graduate Center, CUNY, 2009 | 5 | 2009 |
Third-generation sequencing and the future of genomics. bioRxiv. 2016 H Lee, J Gurtowski, S Yoo, M Nattestad, S Marcus, S Goodwin, ... Table 1, 048603, 0 | 5 | |
On two-dimensional Lyndon words S Marcus, D Sokol String Processing and Information Retrieval: 20th International Symposium …, 2013 | 4 | 2013 |
Small-space 2d compressed dictionary matching S Neuburger, D Sokol Combinatorial Pattern Matching: 21st Annual Symposium, CPM 2010, New York …, 2010 | 4 | 2010 |
Succinct 2d dictionary matching with no slowdown S Neuburger, D Sokol Algorithms and Data Structures: 12th International Symposium, WADS 2011, New …, 2011 | 3 | 2011 |
Double string tandem repeats A Amir, A Butman, GM Landau, S Marcus, D Sokol Algorithmica 85 (1), 170-187, 2023 | 2 | 2023 |
SplitMEM: Graphical pan-genome analysis with suffix skips S Marcus, H Lee, MC Schatz bioRxiv, 003954, 2014 | 2 | 2014 |
The Burrows-Wheeler transform: data compression, suffix arrays, and pattern matching by Donald Adjeroh, Timothy Bell and Amar Mukherjee Springer, 2008 S Neuburger ACM SIGACT News 41 (1), 21-24, 2010 | 1 | 2010 |
Reconstructing Parameterized Strings from Parameterized Suffix and LCP Arrays A Amir, C Guerra, E Kondratovsky, GM Landau, S Marcus, D Sokol String Processing and Information Retrieval: 29th International Symposium …, 2022 | | 2022 |
Review of The Problem With Software: Why Smart Engineers Write Bad Code S Marcus ACM SIGACT News 51 (3), 7-9, 2020 | | 2020 |