| Improved structure, function and compatibility for CellProfiler: modular high-throughput image analysis software L Kamentsky, TR Jones, A Fraser, MA Bray, DJ Logan, KL Madden, ... Bioinformatics 27 (8), 1179-1180, 2011 | 1136 | 2011 |
| Cell Painting, a high-content image-based assay for morphological profiling using multiplexed fluorescent dyes MA Bray, S Singh, H Han, CT Davis, B Borgeson, C Hartland, ... Nature protocols 11 (9), 1757-1774, 2016 | 775 | 2016 |
| Sarcomere alignment is regulated by myocyte shape MA Bray, SP Sheehy, KK Parker Cell motility and the cytoskeleton 65 (8), 641-651, 2008 | 291 | 2008 |
| Identification of Host-Targeted Small Molecules That Restrict Intracellular Mycobacterium tuberculosis Growth SA Stanley, AK Barczak, MR Silvis, SS Luo, K Sogi, M Vokes, MA Bray, ... PLoS pathogens 10 (2), e1003946, 2014 | 275 | 2014 |
| Human tumors instigate granulin-expressing hematopoietic cells that promote malignancy by activating stromal fibroblasts in mice M Elkabets, AM Gifford, C Scheel, B Nilsson, F Reinhardt, MA Bray, ... The Journal of clinical investigation 121 (2), 784-799, 2011 | 255 | 2011 |
| Toward performance-diverse small-molecule libraries for cell-based phenotypic screening using multiplexed high-dimensional profiling MJ Wawer, K Li, SM Gustafsdottir, V Ljosa, NE Bodycombe, MA Marton, ... Proceedings of the National Academy of Sciences 111 (30), 10911-10916, 2014 | 196 | 2014 |
| Rare variants in PPARG with decreased activity in adipocyte differentiation are associated with increased risk of type 2 diabetes AR Majithia, J Flannick, P Shahinian, M Guo, MA Bray, P Fontanillas, ... Proceedings of the National Academy of Sciences 111 (36), 13127-13132, 2014 | 178 | 2014 |
| ZFHX4 interacts with the NuRD core member CHD4 and regulates the glioblastoma tumor-initiating cell state Y Chudnovsky, D Kim, S Zheng, WA Whyte, M Bansal, MA Bray, S Gopal, ... Cell reports 6 (2), 313-324, 2014 | 165 | 2014 |
| Identification of regulators of polyploidization presents therapeutic targets for treatment of AMKL Q Wen, B Goldenson, SJ Silver, M Schenone, V Dancik, Z Huang, ... Cell 150 (3), 575-589, 2012 | 161 | 2012 |
| Experimental and theoretical analysis of phase singularity dynamics in cardiac tissue MA BRAY, SF LIN, RR Aliev, BJ Roth, JP Wikswo Jr Journal of cardiovascular electrophysiology 12 (6), 716-722, 2001 | 161 | 2001 |
| Increased expression of the immune modulatory molecule PD-L1 (CD274) in anaplastic meningioma Z Du, M Abedalthagafi, AA Aizer, AR McHenry, HH Sun, MA Bray, ... Oncotarget 6 (7), 4704, 2015 | 159 | 2015 |
| A dataset of images and morphological profiles of 30 000 small-molecule treatments using the Cell Painting assay MA Bray, SM Gustafsdottir, MH Rohban, S Singh, V Ljosa, KL Sokolnicki, ... Gigascience 6 (12), giw014, 2017 | 157 | 2017 |
| Self-organization of muscle cell structure and function A Grosberg, PL Kuo, CL Guo, NA Geisse, MA Bray, WJ Adams, ... PLoS computational biology 7 (2), e1001088, 2011 | 155 | 2011 |
| Myocyte shape regulates lateral registry of sarcomeres and contractility PL Kuo, H Lee, MA Bray, NA Geisse, YT Huang, WJ Adams, SP Sheehy, ... The American journal of pathology 181 (6), 2030-2037, 2012 | 150 | 2012 |
| Systematic morphological profiling of human gene and allele function via Cell Painting MH Rohban, S Singh, X Wu, JB Berthet, MA Bray, Y Shrestha, X Varelas, ... Elife 6, e24060, 2017 | 139 | 2017 |
| Development and evaluation of deep learning–based segmentation of histologic structures in the kidney cortex with multiple histologic stains CP Jayapandian, Y Chen, AR Janowczyk, MB Palmer, CA Cassol, ... Kidney international 99 (1), 86-101, 2021 | 132 | 2021 |
| Workflow and metrics for image quality control in large-scale high-content screens MA Bray, AN Fraser, TP Hasaka, AE Carpenter Journal of biomolecular screening 17 (2), 266-274, 2012 | 126 | 2012 |
| Nuclear morphology and deformation in engineered cardiac myocytes and tissues MAP Bray, WJ Adams, NA Geisse, AW Feinberg, SP Sheehy, KK Parker Biomaterials 31 (19), 5143-5150, 2010 | 124 | 2010 |
| Considerations in phase plane analysis for nonstationary reentrant cardiac behavior MA Bray, JP Wikswo Physical Review E 65 (5), 051902, 2002 | 121 | 2002 |
| Pipeline for illumination correction of images for high‐throughput microscopy S Singh, MA Bray, TR Jones, AE Carpenter Journal of microscopy 256 (3), 231-236, 2014 | 119 | 2014 |
