Nicolai Juul Birkbak
Nicolai Juul Birkbak
Associate professor, Department of Molecular Medicine (MOMA), Aarhus University
Verified email at clin.au.dk
TitleCited byYear
Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade
N McGranahan, AJS Furness, R Rosenthal, S Ramskov, R Lyngaa, ...
Science 351 (6280), 1463-1469, 2016
10292016
Efficacy of neoadjuvant Cisplatin in triple-negative breast cancer
DP Silver, AL Richardson, AC Eklund, ZC Wang, Z Szallasi, Q Li, N Juul, ...
Journal of clinical oncology 28 (7), 1145, 2010
8912010
Tracking the evolution of non–small-cell lung cancer
M Jamal-Hanjani, GA Wilson, N McGranahan, NJ Birkbak, TBK Watkins, ...
New England Journal of Medicine 376 (22), 2109-2121, 2017
5412017
Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution
C Abbosh, NJ Birkbak, GA Wilson, M Jamal-Hanjani, T Constantin, ...
Nature 545 (7655), 446, 2017
3872017
MicroRNA-antagonism regulates breast cancer stemness and metastasis via TET-family-dependent chromatin remodeling
SJ Song, L Poliseno, MS Song, U Ala, K Webster, C Ng, G Beringer, ...
Cell 154 (2), 311-324, 2013
3492013
Inconsistency in large pharmacogenomic studies
B Haibe-Kains, N El-Hachem, NJ Birkbak, AC Jin, AH Beck, HJWL Aerts, ...
Nature 504 (7480), 389, 2013
3302013
Chromosomal instability confers intrinsic multidrug resistance
AJX Lee, D Endesfelder, AJ Rowan, A Walther, NJ Birkbak, PA Futreal, ...
Cancer research 71 (5), 1858-1870, 2011
3152011
Clonal status of actionable driver events and the timing of mutational processes in cancer evolution
N McGranahan, F Favero, EC de Bruin, NJ Birkbak, Z Szallasi, C Swanton
Science translational medicine 7 (283), 283ra54-283ra54, 2015
2822015
Paradoxical relationship between chromosomal instability and survival outcome in cancer
NJ Birkbak, AC Eklund, Q Li, SE McClelland, D Endesfelder, P Tan, ...
Cancer research 71 (10), 3447-3452, 2011
2142011
Insertion-and-deletion-derived tumour-specific neoantigens and the immunogenic phenotype: a pan-cancer analysis
S Turajlic, K Litchfield, H Xu, R Rosenthal, N McGranahan, JL Reading, ...
The lancet oncology 18 (8), 1009-1021, 2017
1952017
Telomeric allelic imbalance indicates defective DNA repair and sensitivity to DNA-damaging agents
NJ Birkbak, ZC Wang, JY Kim, AC Eklund, Q Li, R Tian, C Bowman-Colin, ...
Cancer discovery 2 (4), 366-375, 2012
1802012
Jetset: selecting the optimal microarray probe set to represent a gene
Q Li, NJ Birkbak, B Gyorffy, Z Szallasi, AC Eklund
BMC bioinformatics 12 (1), 474, 2011
1782011
Allele-specific HLA loss and immune escape in lung cancer evolution
N McGranahan, R Rosenthal, CT Hiley, AJ Rowan, TBK Watkins, ...
Cell 171 (6), 1259-1271. e11, 2017
1682017
Sequenza: allele-specific copy number and mutation profiles from tumor sequencing data
F Favero, T Joshi, AM Marquard, NJ Birkbak, M Krzystanek, Q Li, ...
Annals of Oncology 26 (1), 64-70, 2014
1672014
Tracking genomic cancer evolution for precision medicine: the lung TRACERx study
M Jamal-Hanjani, A Hackshaw, Y Ngai, J Shaw, C Dive, S Quezada, ...
PLoS biology 12 (7), e1001906, 2014
1552014
Chromosomal instability drives metastasis through a cytosolic DNA response
SF Bakhoum, B Ngo, AM Laughney, JA Cavallo, CJ Murphy, P Ly, P Shah, ...
Nature 553 (7689), 467, 2018
1482018
Tracking the genomic evolution of esophageal adenocarcinoma through neoadjuvant chemotherapy
N Murugaesu, GA Wilson, NJ Birkbak, TBK Watkins, N McGranahan, ...
Cancer discovery 5 (8), 821-831, 2015
1352015
Relationship of extreme chromosomal instability with long-term survival in a retrospective analysis of primary breast cancer
R Roylance, D Endesfelder, P Gorman, RA Burrell, J Sander, I Tomlinson, ...
Cancer Epidemiology and Prevention Biomarkers 20 (10), 2183-2194, 2011
1082011
Profiles of genomic instability in high-grade serous ovarian cancer predict treatment outcome
ZC Wang, NJ Birkbak, AC Culhane, R Drapkin, A Fatima, R Tian, ...
Clinical cancer research 18 (20), 5806-5815, 2012
1072012
STAT3 induction of miR-146b forms a feedback loop to inhibit the NF-κB to IL-6 signaling axis and STAT3-driven cancer phenotypes
M Xiang, NJ Birkbak, V Vafaizadeh, SR Walker, JE Yeh, S Liu, Y Kroll, ...
Sci. Signal. 7 (310), ra11-ra11, 2014
1062014
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