| Antisense transcription in the mammalian transcriptome S Katayama, Y Tomaru, T Kasukawa, K Waki, M Nakanishi, M Nakamura, ... Science 309 (5740), 1564-1566, 2005 | 2045 | 2005 |
| Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits F Lutzoni, F Kauff, CJ Cox, D McLaughlin, G Celio, B Dentinger, ... American journal of botany 91 (10), 1446-1480, 2004 | 961 | 2004 |
| A prokaryotic gene cluster involved in synthesis of lysine through the amino adipate pathway: a key to the evolution of amino acid biosynthesis H Nishida, M Nishiyama, N Kobashi, T Kosuge, T Hoshino, H Yamane Genome Research 9 (12), 1175-1183, 1999 | 143 | 1999 |
| Phylogenetic relationships among Taphrina, Saitoella, and other higher fungi. H Nishida, J Sugiyama Molecular biology and evolution 10 (2), 431-436, 1993 | 118 | 1993 |
| Histone H3 acetylated at lysine 9 in promoter is associated with low nucleosome density in the vicinity of transcription start site in human cell H Nishida, T Suzuki, S Kondo, H Miura, Y Fujimura, Y Hayashizaki Chromosome research 14, 203-211, 2006 | 117 | 2006 |
| Archiascomycetes: detection of a major new lineage within the Ascomycota H Nishida, J Sugiyama Mycoscience 35 (4), 361-366, 1994 | 110 | 1994 |
| Symbiobacterium thermophilum gen. nov., sp. nov., a symbiotic thermophile that depends on co-culture with a Bacillus strain for growth. M Ohno, H Shiratori, MJ Park, Y Saitoh, Y Kumon, N Yamashita, A Hirata, ... International journal of systematic and evolutionary microbiology 50 (5 …, 2000 | 108 | 2000 |
| Evolution of γ‐butyrolactone synthases and receptors in Streptomyces H Nishida, Y Ohnishi, T Beppu, S Horinouchi Environmental microbiology 9 (8), 1986-1994, 2007 | 94 | 2007 |
| Comparative analyses of base compositions, DNA sizes, and dinucleotide frequency profiles in archaeal and bacterial chromosomes and plasmids H Nishida International journal of evolutionary biology 2012, 2012 | 84 | 2012 |
| Response of the Pseudomonas host chromosomal transcriptome to carriage of the IncP‐7 plasmid pCAR1 M Shintani, Y Takahashi, H Tokumaru, K Kadota, H Hara, M Miyakoshi, ... Environmental microbiology 12 (6), 1413-1426, 2010 | 65 | 2010 |
| The higher fungus Protomyces inouyei has two group I introns in the 18S rRNA Gene H Nishida, PA Blanz, J Sugiyama Journal of molecular evolution 37, 25-28, 1993 | 64 | 1993 |
| Cloning and characterization of a jasmonic acid-responsive gene encoding 12-oxophytodienoic acid reductase in suspension-cultured rice cells H Sobajima, M Takeda, M Sugimori, N Kobashi, K Kiribuchi, EM Cho, ... Planta 216, 692-698, 2003 | 62 | 2003 |
| Lysine and arginine biosyntheses mediated by a common carrier protein in Sulfolobus T Ouchi, T Tomita, A Horie, A Yoshida, K Takahashi, H Nishida, K Lassak, ... Nature Chemical Biology 9 (4), 277-283, 2013 | 54 | 2013 |
| A common group I intron between a plant parasitic fungus and its host. H Nishida, J Sugiyama Molecular biology and evolution 12 (5), 883-886, 1995 | 54 | 1995 |
| Whole-genome comparison clarifies close phylogenetic relationships between the phyla Dictyoglomi and Thermotogae H Nishida, T Beppu, K Ueda Genomics 98 (5), 370-375, 2011 | 53 | 2011 |
| What is characteristic of fungal lysine synthesis through the α-aminoadipate pathway? H Nishida, M Nishiyama Journal of molecular evolution 51, 299-302, 2000 | 52 | 2000 |
| Pmr, a histone-like protein H1 (H-NS) family protein encoded by the IncP-7 plasmid pCAR1, is a key global regulator that alters host function CS Yun, C Suzuki, K Naito, T Takeda, Y Takahashi, F Sai, T Terabayashi, ... Journal of Bacteriology 192 (18), 4720-4731, 2010 | 51 | 2010 |
| Evolution of genome base composition and genome size in bacteria H Nishida Frontiers in microbiology 3, 39093, 2012 | 49 | 2012 |
| Evolutionary relationships of membrers of the generaTaphrina, Protomyces, Schizosaccharomyces, and related taxa within the archiascomycetes: Integrated … W Sjamsuridzal, Y Tajiri, H Nishida, TB Thuan, H Kawasaki, A Hirata, ... Mycoscience 38, 267-280, 1997 | 49 | 1997 |
| Phylogenetic relationships among mycoplasmas based on the whole genomic information K Oshima, H Nishida Journal of Molecular Evolution 65, 249-258, 2007 | 48 | 2007 |
