| Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea CB Walker, JR de la Torre, MG Klotz, H Urakawa, N Pinel, DJ Arp, ... Proceedings of the National Academy of Sciences 107 (19), 8818-8823, 2010 | 993 | 2010 |
| Metabolic modeling of a mutualistic microbial community S Stolyar, S Van Dien, KL Hillesland, N Pinel, TJ Lie, JA Leigh, DA Stahl Molecular systems biology 3 (1), 92, 2007 | 578 | 2007 |
| Genes for the cytoskeletal protein tubulin in the bacterial genus Prosthecobacter C Jenkins, R Samudrala, I Anderson, BP Hedlund, G Petroni, ... Proceedings of the National Academy of Sciences 99 (26), 17049-17054, 2002 | 201 | 2002 |
| IMP: a pipeline for reproducible reference-independent integrated metagenomic and metatranscriptomic analyses S Narayanasamy, Y Jarosz, EEL Muller, A Heintz-Buschart, M Herold, ... Genome biology 17, 1-21, 2016 | 135 | 2016 |
| Verminephrobacter eiseniae gen. nov., sp. nov., a nephridial symbiont of the earthworm Eisenia foetida (Savigny) N Pinel, SK Davidson, DA Stahl International journal of systematic and evolutionary microbiology 58 (9 …, 2008 | 88 | 2008 |
| Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ... Nature communications 5 (1), 5603, 2014 | 82 | 2014 |
| Erosion of functional independence early in the evolution of a microbial mutualism KL Hillesland, S Lim, JJ Flowers, S Turkarslan, N Pinel, GM Zane, N Elliott, ... Proceedings of the National Academy of Sciences 111 (41), 14822-14827, 2014 | 81 | 2014 |
| Spatial and temporal variability in a stratified hypersaline microbial mat community JG Dillon, S Miller, B Bebout, M Hullar, N Pinel, DA Stahl FEMS Microbiology Ecology 68 (1), 46-58, 2009 | 75 | 2009 |
| Alignment-free visualization of metagenomic data by nonlinear dimension reduction CC Laczny, N Pinel, N Vlassis, P Wilmes Scientific reports 4 (1), 4516, 2014 | 73 | 2014 |
| Forecasting PM10 and PM2. 5 in the Aburrá Valley (Medellín, Colombia) via EnKF based data assimilation S Lopez-Restrepo, A Yarce, N Pinel, OL Quintero, A Segers, AW Heemink Atmospheric Environment 232, 117507, 2020 | 38 | 2020 |
| Genome sequence of “Candidatus Microthrix parvicella” Bio17-1, a long-chain-fatty-acid-accumulating filamentous actinobacterium from a biological wastewater treatment plant EEL Muller, N Pinel, JD Gillece, JM Schupp, LB Price, DM Engelthaler, ... Journal of bacteriology 194 (23), 6670-6671, 2012 | 32 | 2012 |
| Recovery of temperate Desulfovibrio vulgaris bacteriophage using a novel host strain CB Walker, SS Stolyar, N Pinel, HCB Yen, Z He, J Zhou, JD Wall, ... Environmental microbiology 8 (11), 1950-1959, 2006 | 29 | 2006 |
| Genome Sequence of the Thermophilic Cyanobacterium Thermosynechococcus sp. Strain NK55a S Stolyar, Z Liu, V Thiel, LP Tomsho, N Pinel, WC Nelson, SR Lindemann, ... Genome announcements 2 (1), 10.1128/genomea. 01060-13, 2014 | 27 | 2014 |
| Purifying Selection and Molecular Adaptation in the Genome of Verminephrobacter, the Heritable Symbiotic Bacteria of Earthworms KU Kjeldsen, T Bataillon, N Pinel, S De Mita, MB Lund, F Panitz, ... Genome biology and evolution 4 (3), 307-315, 2012 | 27 | 2012 |
| Model organisms retain an “ecological memory” of complex ecologically relevant environmental variation KD Beer, EJ Wurtmann, N Pinel, NS Baliga Applied and environmental microbiology 80 (6), 1821-1831, 2014 | 23 | 2014 |
| Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity CB Walker, S Stolyar, D Chivian, N Pinel, JA Gabster, PS Dehal, Z He, ... Environmental microbiology 11 (9), 2244-2252, 2009 | 23 | 2009 |
| Urban air quality modeling using low-cost sensor network and data assimilation in the aburrá valley, colombia S Lopez-Restrepo, A Yarce, N Pinel, OL Quintero, A Segers, AW Heemink Atmosphere 12 (1), 91, 2021 | 19 | 2021 |
| On the mathematical modelling and data assimilation for air pollution assessment in the Tropical Andes OLQ Montoya, ED Niño-Ruiz, N Pinel Environmental Science and Pollution Research 27, 35993-36012, 2020 | 13 | 2020 |
| An efficient ensemble Kalman Filter implementation via shrinkage covariance matrix estimation: exploiting prior knowledge S Lopez-Restrepo, ED Nino-Ruiz, LG Guzman-Reyes, A Yarce, ... Computational Geosciences 25, 985-1003, 2021 | 11 | 2021 |
| Earthworm symbiont Verminephrobacter eiseniae mediates natural transformation within host egg capsules using type IV pili SK Davidson, GF Dulla, RA Go, DA Stahl, N Pinel Frontiers in Microbiology 5, 546, 2014 | 10 | 2014 |
David A. StahlProfessor of Environmental Engineering, University of WashingtonVerified email at u.washington.edu
