David Simcha
David Simcha
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Tackling the widespread and critical impact of batch effects in high-throughput data
JT Leek, RB Scharpf, HC Bravo, D Simcha, B Langmead, WE Johnson, ...
Nature Reviews Genetics 11 (10), 733-739, 2010
Accelerating large-scale inference with anisotropic vector quantization
R Guo, P Sun, E Lindgren, Q Geng, D Simcha, F Chern, S Kumar
International Conference on Machine Learning, 3887-3896, 2020
Quantization based fast inner product search
R Guo, S Kumar, K Choromanski, D Simcha
Artificial intelligence and statistics, 482-490, 2016
Multiscale quantization for fast similarity search
X Wu, R Guo, AT Suresh, S Kumar, DN Holtmann-Rice, D Simcha, F Yu
Advances in neural information processing systems 30, 2017
The limits of de novo DNA motif discovery
D Simcha, ND Price, D Geman
PloS one 7 (11), e47836, 2012
Roles of DNA polymerase I in leading and lagging-strand replication defined by a high-resolution mutation footprint of ColE1 plasmid replication
JM Allen, DM Simcha, NG Ericson, DL Alexander, JT Marquette, ...
Nucleic acids research 39 (16), 7020-7033, 2011
Fast classification with binary prototypes
K Zhong, R Guo, S Kumar, B Yan, D Simcha, I Dhillon
Artificial intelligence and statistics, 1255-1263, 2017
Context specific transcription factor prediction
E Yang, D Simcha, RR Almon, DC Dubois, WJ Jusko, IP Androulakis
Annals of biomedical engineering 35 (6), 1053-1067, 2007
Identification of direction in gene networks from expression and methylation
DM Simcha, L Younes, MJ Aryee, D Geman
BMC systems biology 7 (1), 1-15, 2013
Quantization-based fast inner product search
R Guo, S Kumar, KM Choromanski, DM Simcha
US Patent 10,255,323, 2019
Exemplar-based large vocabulary speech recognition using k-nearest neighbors
Y Xu, O Siohan, D Simcha, S Kumar, H Liao
2015 IEEE International Conference on Acoustics, Speech and Signal …, 2015
Efficient inner product approximation in hybrid spaces
X Wu, R Guo, D Simcha, D Dopson, S Kumar
arXiv preprint arXiv:1903.08690, 2019
Scaling hierarchical agglomerative clustering to billion-sized datasets
B Sumengen, A Rajagopalan, G Citovsky, D Simcha, O Bachem, P Mitra, ...
arXiv preprint arXiv:2105.11653, 2021
Statistical learning applied to transcriptional regulation in small N, large D domains
DM Simcha
The Johns Hopkins University, 2013
New loss functions for fast maximum inner product search
R Guo, Q Geng, D Simcha, F Chern, P Sun, S Kumar
Multiscale Quantization for Fast Similarity Search
X Wu, D Simcha, D Holtmann-rice, S Kumar, AT Suresh, R Guo, X Yu
US Patent App. 16/638,802, 2020
Efficient inner product operations
X Wu, D Dopson, DM Simcha, S Kumar, R Guo
US Patent App. 16/411,376, 2019
Local orthogonal decomposition for maximum inner product search
X Wu, R Guo, S Kumar, D Simcha
arXiv preprint arXiv:1903.10391, 2019
Local orthogonal decomposition for maximum inner product search
X Wu, DM Simcha, S Kumar, R Guo
US Patent 11,354,287, 2022
Systems and Methods for Weighted Quantization
R Guo, D Simcha, Q Geng, F Chern, S Kumar, X Wu
US Patent App. 17/001,850, 2021
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