Damian Rafal Plichta
Damian Rafal Plichta
Broad Institute of MIT and Harvard
Bekræftet mail på broadinstitute.org
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Human gut microbes impact host serum metabolome and insulin sensitivity
HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ...
Nature 535 (7612), 376-381, 2016
10452016
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
7462014
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ...
Nature 569 (7758), 655-662, 2019
6892019
A defined commensal consortium elicits CD8 T cells and anti-cancer immunity
T Tanoue, S Morita, DR Plichta, AN Skelly, W Suda, Y Sugiura, ...
Nature 565 (7741), 600-605, 2019
4242019
Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut
HM Roager, LBS Hansen, MI Bahl, HL Frandsen, V Carvalho, RJ Gøbel, ...
Nature microbiology 1 (9), 1-9, 2016
1942016
Akkermansia muciniphila induces intestinal adaptive immune responses during homeostasis
E Ansaldo, LC Slayden, KL Ching, MA Koch, NK Wolf, DR Plichta, ...
Science 364 (6446), 1179-1184, 2019
1392019
Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life
T Vatanen, DR Plichta, J Somani, PC Münch, TD Arthur, AB Hall, S Rudolf, ...
Nature microbiology 4 (3), 470-479, 2019
1032019
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
GF Difford, DR Plichta, P Løvendahl, J Lassen, SJ Noel, O Højberg, ...
PLoS genetics 14 (10), e1007580, 2018
942018
Therapeutic opportunities in inflammatory bowel disease: mechanistic dissection of host-microbiome relationships
DR Plichta, DB Graham, S Subramanian, RJ Xavier
Cell 178 (5), 1041-1056, 2019
722019
Cholesterol metabolism by uncultured human gut bacteria influences host cholesterol level
DJ Kenny, DR Plichta, D Shungin, N Koppel, AB Hall, B Fu, RS Vasan, ...
Cell host & microbe 28 (2), 245-257. e6, 2020
462020
Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut
X Jiang, AB Hall, TD Arthur, DR Plichta, CT Covington, M Poyet, ...
Science 363 (6423), 181-187, 2019
442019
Transcriptional interactions suggest niche segregation among microorganisms in the human gut
DR Plichta, AS Juncker, M Bertalan, E Rettedal, L Gautier, E Varela, ...
Nature microbiology 1 (11), 1-6, 2016
352016
Contamination of the Arctic reflected in microbial metagenomes from the Greenland ice sheet
AL Hauptmann, T Sicheritz-Pontén, KA Cameron, J Bælum, DR Plichta, ...
Environmental Research Letters 12 (7), 074019, 2017
292017
Mapping the genome of Plasmodium falciparum on the drug-like chemical space reveals novel anti-malarial targets and potential drug leads
K Jensen, D Plichta, G Panagiotou, I Kouskoumvekaki
Molecular BioSystems 8 (6), 1678-1685, 2012
242012
Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle
B Buitenhuis, J Lassen, SJ Noel, DR Plichta, P Sørensen, GF Difford, ...
Genetics Selection Evolution 51 (1), 1-8, 2019
152019
Multi-“-omics” profiling in patients with quiescent inflammatory bowel disease identifies biomarkers predicting relapse
NZ Borren, D Plichta, AD Joshi, G Bonilla, R Sadreyev, H Vlamakis, ...
Inflammatory Bowel Diseases 26 (10), 1524-1532, 2020
92020
Alterations in fecal microbiomes and serum metabolomes of fatigued patients with quiescent inflammatory bowel diseases
NZ Borren, D Plichta, AD Joshi, G Bonilla, V Peng, FP Colizzo, J Luther, ...
Clinical Gastroenterology and Hepatology 19 (3), 519-527. e5, 2021
72021
Predictive ability of host genetics and rumen microbiome for subclinical ketosis
G Gebreyesus, GF Difford, B Buitenhuis, J Lassen, SJ Noel, O Højberg, ...
Journal of dairy science 103 (5), 4557-4569, 2020
72020
Novel bile acid biosynthetic pathways are enriched in the microbiome of centenarians
Y Sato, K Atarashi, DR Plichta, Y Arai, S Sasajima, SM Kearney, W Suda, ...
Nature, 1-7, 2021
62021
Plasmalogen Biosynthesis by Anaerobic Bacteria: Identification of a Two-Gene Operon Responsible for Plasmalogen Production in Clostridium perfringens
DR Jackson, CD Cassilly, DR Plichta, H Vlamakis, H Liu, SB Melville, ...
ACS chemical biology 16 (1), 6-13, 2020
52020
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Artikler 1–20