Damian Rafal Plichta
Damian Rafal Plichta
Broad Institute of MIT and Harvard
Bekræftet mail på broadinstitute.org
Citeret af
Citeret af
Human gut microbes impact host serum metabolome and insulin sensitivity
HK Pedersen, V Gudmundsdottir, HB Nielsen, T Hyotylainen, T Nielsen, ...
Nature 535 (7612), 376-381, 2016
Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes
HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ...
Nature biotechnology 32 (8), 822-828, 2014
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ...
Nature 569 (7758), 655-662, 2019
A defined commensal consortium elicits CD8 T cells and anti-cancer immunity
T Tanoue, S Morita, DR Plichta, AN Skelly, W Suda, Y Sugiura, ...
Nature 565 (7741), 600-605, 2019
Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut
HM Roager, LBS Hansen, MI Bahl, HL Frandsen, V Carvalho, RJ Gøbel, ...
Nature microbiology 1 (9), 1-9, 2016
Akkermansia muciniphila induces intestinal adaptive immune responses during homeostasis
E Ansaldo, LC Slayden, KL Ching, MA Koch, NK Wolf, DR Plichta, ...
Science 364 (6446), 1179-1184, 2019
Genomic variation and strain-specific functional adaptation in the human gut microbiome during early life
T Vatanen, DR Plichta, J Somani, PC Münch, TD Arthur, AB Hall, S Rudolf, ...
Nature microbiology 4 (3), 470-479, 2019
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
GF Difford, DR Plichta, P Løvendahl, J Lassen, SJ Noel, O Højberg, ...
PLoS genetics 14 (10), e1007580, 2018
Therapeutic opportunities in inflammatory bowel disease: mechanistic dissection of host-microbiome relationships
DR Plichta, DB Graham, S Subramanian, RJ Xavier
Cell 178 (5), 1041-1056, 2019
Cholesterol metabolism by uncultured human gut bacteria influences host cholesterol level
DJ Kenny, DR Plichta, D Shungin, N Koppel, AB Hall, B Fu, RS Vasan, ...
Cell host & microbe 28 (2), 245-257. e6, 2020
Invertible promoters mediate bacterial phase variation, antibiotic resistance, and host adaptation in the gut
X Jiang, AB Hall, TD Arthur, DR Plichta, CT Covington, M Poyet, ...
Science 363 (6423), 181-187, 2019
Transcriptional interactions suggest niche segregation among microorganisms in the human gut
DR Plichta, AS Juncker, M Bertalan, E Rettedal, L Gautier, E Varela, ...
Nature microbiology 1 (11), 1-6, 2016
Contamination of the Arctic reflected in microbial metagenomes from the Greenland ice sheet
AL Hauptmann, T Sicheritz-Pontén, KA Cameron, J Bælum, DR Plichta, ...
Environmental Research Letters 12 (7), 074019, 2017
Mapping the genome of Plasmodium falciparum on the drug-like chemical space reveals novel anti-malarial targets and potential drug leads
K Jensen, D Plichta, G Panagiotou, I Kouskoumvekaki
Molecular BioSystems 8 (6), 1678-1685, 2012
Impact of the rumen microbiome on milk fatty acid composition of Holstein cattle
B Buitenhuis, J Lassen, SJ Noel, DR Plichta, P Sørensen, GF Difford, ...
Genetics Selection Evolution 51 (1), 1-8, 2019
Multi-“-omics” profiling in patients with quiescent inflammatory bowel disease identifies biomarkers predicting relapse
NZ Borren, D Plichta, AD Joshi, G Bonilla, R Sadreyev, H Vlamakis, ...
Inflammatory Bowel Diseases 26 (10), 1524-1532, 2020
Alterations in fecal microbiomes and serum metabolomes of fatigued patients with quiescent inflammatory bowel diseases
NZ Borren, D Plichta, AD Joshi, G Bonilla, V Peng, FP Colizzo, J Luther, ...
Clinical Gastroenterology and Hepatology 19 (3), 519-527. e5, 2021
Predictive ability of host genetics and rumen microbiome for subclinical ketosis
G Gebreyesus, GF Difford, B Buitenhuis, J Lassen, SJ Noel, O Højberg, ...
Journal of dairy science 103 (5), 4557-4569, 2020
Novel bile acid biosynthetic pathways are enriched in the microbiome of centenarians
Y Sato, K Atarashi, DR Plichta, Y Arai, S Sasajima, SM Kearney, W Suda, ...
Nature, 1-7, 2021
Plasmalogen Biosynthesis by Anaerobic Bacteria: Identification of a Two-Gene Operon Responsible for Plasmalogen Production in Clostridium perfringens
DR Jackson, CD Cassilly, DR Plichta, H Vlamakis, H Liu, SB Melville, ...
ACS chemical biology 16 (1), 6-13, 2020
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Artikler 1–20