Thomas Nordahl Petersen
Thomas Nordahl Petersen
DTU Food, National Food Institute, Denmark
Bekræftet mail på food.dtu.dk
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SignalP 4.0: discriminating signal peptides from transmembrane regions
TN Petersen, S Brunak, G Von Heijne, H Nielsen
Nature methods 8 (10), 785-786, 2011
88702011
SignalP 5.0 improves signal peptide predictions using deep neural networks
JJA Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, O Winther, ...
Nature biotechnology 37 (4), 420-423, 2019
14912019
A generic method for assignment of reliability scores applied to solvent accessibility predictions
B Petersen, TN Petersen, P Andersen, M Nielsen, C Lundegaard
BMC structural biology 9 (1), 1-10, 2009
6232009
CPHmodels-3.0—remote homology modeling using structure-guided sequence profiles
M Nielsen, C Lundegaard, O Lund, TN Petersen
Nucleic acids research 38 (suppl_2), W576-W581, 2010
4012010
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
RS Hendriksen, P Munk, P Njage, B Van Bunnik, L McNally, ...
Nature communications 10 (1), 1-12, 2019
2572019
Prediction of protein secondary structure at 80% accuracy
TN Petersen, C Lundegaard, M Nielsen, H Bohr, J Bohr, S Brunak, ...
Proteins: Structure, Function, and Bioinformatics 41 (1), 17-20, 2000
1972000
The crystal structure of rhamnogalacturonase A from Aspergillus aculeatus: a right-handed parallel β helix
TN Petersen, S Kauppinen, S Larsen
Structure 5 (4), 533-544, 1997
1711997
Abundance and diversity of the faecal resistome in slaughter pigs and broilers in nine European countries
P Munk, BE Knudsen, O Lukjancenko, ASR Duarte, L Van Gompel, ...
Nature microbiology 3 (8), 898-908, 2018
1222018
A systematic study of site-specific GalNAc-type O-glycosylation modulating proprotein convertase processing
KTBG Schjoldager, MB Vester-Christensen, CK Goth, TN Petersen, ...
Journal of Biological Chemistry 286 (46), 40122-40132, 2011
982011
NetTurnP–neural network prediction of beta-turns by use of evolutionary information and predicted protein sequence features
B Petersen, C Lundegaard, TN Petersen
PLoS One 5 (11), e15079, 2010
962010
Pancreatic spasmolytic polypeptide: first three-dimensional structure of a member of the mammalian trefoil family of peptides
M Gajhede, TN Petersen, A Henriksen, JFW Petersen, Z Dauter, ...
Structure 1 (4), 253-262, 1993
751993
Meta-genomic analysis of toilet waste from long distance flights; a step towards global surveillance of infectious diseases and antimicrobial resistance
TN Petersen, S Rasmussen, H Hasman, C Carøe, J Bælum, AC Schultz, ...
Scientific reports 5 (1), 1-9, 2015
692015
MGmapper: reference based mapping and taxonomy annotation of metagenomics sequence reads
TN Petersen, O Lukjancenko, MCF Thomsen, M Maddalena Sperotto, ...
PloS one 12 (5), e0176469, 2017
672017
Midbrain expression of Delta-like 1 homologue is regulated by GDNF and is associated with dopaminergic differentiation
NS Christophersen, M Grønborg, TN Petersen, L Fjord-Larsen, ...
Experimental neurology 204 (2), 791-801, 2007
622007
Cofactory: Sequence‐based prediction of cofactor specificity of Rossmann folds
HM Geertz‐Hansen, N Blom, AM Feist, S Brunak, TN Petersen
Proteins: Structure, Function, and Bioinformatics 82 (9), 1819-1828, 2014
452014
Norgal: extraction and de novo assembly of mitochondrial DNA from whole-genome sequencing data
K Al-Nakeeb, TN Petersen, T Sicheritz-Pontén
BMC bioinformatics 18 (1), 1-7, 2017
442017
Detection of mobile genetic elements associated with antibiotic resistance in Salmonella enterica using a newly developed web tool: MobileElementFinder
MHK Johansson, V Bortolaia, S Tansirichaiya, FM Aarestrup, AP Roberts, ...
Journal of Antimicrobial Chemotherapy 76 (1), 101-109, 2021
342021
Identification of novel genes regulated in the developing human ventral mesencephalon
JR Jørgensen, B Juliusson, KF Henriksen, C Hansen, S Knudsen, ...
Experimental neurology 198 (2), 427-437, 2006
272006
Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets
A Brinkmann, A Andrusch, A Belka, C Wylezich, D Höper, A Pohlmann, ...
Journal of clinical microbiology 57 (8), e00466-19, 2019
222019
Prediction of disease causing non-synonymous SNPs by the Artificial Neural Network Predictor NetDiseaseSNP
MB Johansen, JMG Izarzugaza, S Brunak, TN Petersen, R Gupta
PloS one 8 (7), e68370, 2013
222013
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Artikler 1–20