Sol Katzman
Sol Katzman
UC Santa Cruz Genomics Institute
Verified email at soe.ucsc.edu
Title
Cited by
Cited by
Year
An RNA gene expressed during cortical development evolved rapidly in humans
KS Pollard, SR Salama, N Lambert, MA Lambot, S Coppens, JS Pedersen, ...
Nature 443 (7108), 167, 2006
9372006
Forces shaping the fastest evolving regions in the human genome
KS Pollard, SR Salama, B King, AD Kern, T Dreszer, S Katzman, A Siepel, ...
PLoS genetics 2 (10), e168, 2006
4112006
FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing
JG Underwood, AV Uzilov, S Katzman, CS Onodera, JE Mainzer, ...
Nature methods 7 (12), 995, 2010
3002010
Human genome ultraconserved elements are ultraselected
S Katzman, AD Kern, G Bejerano, G Fewell, L Fulton, RK Wilson, ...
Science 317 (5840), 915-915, 2007
2342007
An evolutionary arms race between KRAB zinc-finger genes ZNF91/93 and SVA/L1 retrotransposons
FMJ Jacobs, D Greenberg, N Nguyen, M Haeussler, AD Ewing, ...
Nature 516 (7530), 242, 2014
2322014
Human tRNA genes function as chromatin insulators
JR Raab, J Chiu, J Zhu, S Katzman, S Kurukuti, PA Wade, D Haussler, ...
The EMBO journal 31 (2), 330-350, 2012
1212012
Frac-seq reveals isoform-specific recruitment to polyribosomes
T Sterne-Weiler, RT Martinez-Nunez, JM Howard, I Cvitovik, S Katzman, ...
Genome research 23 (10), 1615-1623, 2013
812013
Competition between pre-mRNAs for the splicing machinery drives global regulation of splicing
EM Munding, L Shiue, S Katzman, JP Donohue, M Ares
Molecular cell 51 (3), 338-348, 2013
772013
Double minute chromosomes in glioblastoma multiforme are revealed by precise reconstruction of oncogenic amplicons
JZ Sanborn, SR Salama, M Grifford, CW Brennan, T Mikkelsen, ...
Cancer research 73 (19), 6036-6045, 2013
662013
Ongoing GC-biased evolution is widespread in the human genome and enriched near recombination hot spots
S Katzman, JA Capra, D Haussler, KS Pollard
Genome biology and evolution 3, 614-626, 2011
582011
Foxg1 coordinates the switch from nonradially to radially migrating glutamatergic subtypes in the neocortex through spatiotemporal repression
T Kumamoto, K Toma, WL McKenna, T Kasukawa, S Katzman, B Chen, ...
Cell reports 3 (3), 931-945, 2013
552013
RNA-binding protein IGF2BP3 targeting of oncogenic transcripts promotes hematopoietic progenitor proliferation
JK Palanichamy, TM Tran, JM Howard, JR Contreras, TR Fernando, ...
The Journal of clinical investigation 126 (4), 1495-1511, 2016
372016
Quaking promotes monocyte differentiation into pro-atherogenic macrophages by controlling pre-mRNA splicing and gene expression
RG De Bruin, L Shiue, J Prins, HC De Boer, A Singh, WS Fagg, ...
Nature communications 7, 10846, 2016
372016
Mating of the stichotrichous ciliate Oxytricha trifallax induces production of a class of 27 nt small RNAs derived from the parental macronucleus
AM Zahler, ZT Neeb, A Lin, S Katzman
PLoS One 7 (8), e42371, 2012
372012
TBR1 regulates autism risk genes in the developing neocortex
JH Notwell, WE Heavner, SF Darbandi, S Katzman, WL McKenna, ...
Genome research 26 (8), 1013-1022, 2016
352016
Nuclear factor one B regulates neural stem cell differentiation and axonal projection of corticofugal neurons
J Betancourt, S Katzman, B Chen
Journal of Comparative Neurology 522 (1), 6-35, 2014
342014
Mutual regulation between Satb2 and Fezf2 promotes subcerebral projection neuron identity in the developing cerebral cortex
WL McKenna, CF Ortiz-Londono, TK Mathew, K Hoang, S Katzman, ...
Proceedings of the National Academy of Sciences 112 (37), 11702-11707, 2015
302015
IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC
H Ennajdaoui, JM Howard, T Sterne-Weiler, F Jahanbani, DJ Coyne, ...
Cell reports 15 (9), 1876-1883, 2016
272016
GC-biased evolution near human accelerated regions
S Katzman, AD Kern, KS Pollard, SR Salama, D Haussler
PLoS genetics 6 (5), e1000960, 2010
272010
CRISPR/Cas-based screening of long non-coding RNAs (lncRNAs) in macrophages with an NF-κB reporter
S Covarrubias, EK Robinson, B Shapleigh, A Vollmers, S Katzman, ...
Journal of Biological Chemistry 292 (51), 20911-20920, 2017
262017
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Articles 1–20