Noah M. Daniels
Noah M. Daniels
Assistant Professor, Computer Science, University of Rhode Island
Verified email at cs.uri.edu - Homepage
Title
Cited by
Cited by
Year
Going the distance for protein function prediction: a new distance metric for protein interaction networks
M Cao, H Zhang, J Park, NM Daniels, ME Crovella, LJ Cowen, B Hescott
PloS one 8 (10), e76339, 2013
862013
Compressive genomics for protein databases
NM Daniels, A Gallant, J Peng, LJ Cowen, M Baym, B Berger
Bioinformatics 29 (13), i283-i290, 2013
492013
Entropy-Scaling Search of Massive Biological Data
YW Yu, NM Daniels, DC Danko, B Berger
Cell Systems 1 (2), 130-140, 2015
462015
Fault tolerance in protein interaction networks: stable bipartite subgraphs and redundant pathways
A Brady, K Maxwell, N Daniels, LJ Cowen
PloS one 4 (4), e5364, 2009
392009
Computational biology in the 21st century: Scaling with compressive algorithms
B Berger, NM Daniels, YW Yu
Communications of the ACM 59 (8), 72-80, 2016
352016
The Maelstrom: Network Service Debugging via" Ineffective Procedures".
AL Couch, N Daniels
LISA, 63-78, 2001
342001
SMURFLite: combining simplified Markov random fields with simulated evolution improves remote homology detection for beta-structural proteins into the twilight zone
NM Daniels, R Hosur, B Berger, LJ Cowen
Bioinformatics 28 (9), 1216-1222, 2012
272012
Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment
NM Daniels, S Nadimpalli, LJ Cowen
BMC bioinformatics 13 (1), 1-8, 2012
212012
Touring protein space with Matt
N Daniels, A Kumar, L Cowen, M Menke
IEEE/ACM transactions on computational biology and bioinformatics 9 (1), 286-293, 2011
172011
An evaluation framework for lossy compression of genome sequencing quality values
C Alberti, N Daniels, M Hernaez, J Voges, RL Goldfeder, ...
2016 Data Compression Conference (DCC), 221-230, 2016
142016
MRFy: remote homology detection for beta-structural proteins using Markov random fields and stochastic search
NM Daniels, A Gallant, N Ramsey, LJ Cowen
IEEE/ACM transactions on computational biology and bioinformatics 12 (1), 4-16, 2014
112014
Plasmodium falciparum K76T pfcrt gene mutations and parasite population structure, Haiti, 2006–2009
M Charles, S Das, R Daniels, L Kirkman, GG Delva, R Destine, ...
Emerging infectious diseases 22 (5), 786, 2016
92016
The utility of genomic data for Plasmodium vivax population surveillance
RF Daniels, BL Rice, NM Daniels, SK Volkman, DL Hartl
Pathogens and global health 109 (3), 153-161, 2015
92015
Touring protein space with Matt
N Daniels, A Kumar, L Cowen, M Menke
International Symposium on Bioinformatics Research and Applications, 18-28, 2010
82010
Experience report: Haskell in computational biology
NM Daniels, A Gallant, N Ramsey
Proceedings of the 17th ACM SIGPLAN international conference on Functional …, 2012
52012
Clustered hierarchical entropy-scaling search of astronomical and biological data
N Ishaq, G Student, NM Daniels
2019 IEEE International Conference on Big Data (Big Data), 780-789, 2019
32019
Efficient distance calculations between genomes using mathematical approximation
Y Hrytsenko, NM Daniels, RS Schwartz
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
22018
ISMB 2014 Proceedings Papers Committee
S Batzoglu, R Schwartz, T Lengauer, B Bioimaging, H Shatkay, S Kasif, ...
Bioinformatics 30 (12), i3-i8, 2014
12014
Microarray Data Analysis of Survival Times of Patients with Lung Adenocarcinomas Using ADC and K-Medians Clustering
W Zhou, W Wu, N Palmer, E Mower, N Daniels, L Cowen, A Blumer
Methods of Microarray Data Analysis, 175-190, 2005
12005
Clustered Hierarchical Anomaly and Outlier Detection Algorithms
N Ishaq, TJ Howard III, NM Daniels
arXiv preprint arXiv:2103.11774, 2021
2021
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