| KAAS: an automatic genome annotation and pathway reconstruction server Y Moriya, M Itoh, S Okuda, AC Yoshizawa, M Kanehisa Nucleic acids research 35 (suppl_2), W182-W185, 2007 | 3148 | 2007 |
| PathPred: an enzyme-catalyzed metabolic pathway prediction server Y Moriya, D Shigemizu, M Hattori, T Tokimatsu, M Kotera, S Goto, ... Nucleic acids research 38 (suppl_2), W138-W143, 2010 | 239 | 2010 |
| EGassembler: online bioinformatics service for large-scale processing, clustering and assembling ESTs and genomic DNA fragments A Masoudi-Nejad, K Tonomura, S Kawashima, Y Moriya, M Suzuki, M Itoh, ... Nucleic acids research 34 (suppl_2), W459-W462, 2006 | 185 | 2006 |
| KEGG OC: a large-scale automatic construction of taxonomy-based ortholog clusters A Nakaya, T Katayama, M Itoh, K Hiranuka, S Kawashima, Y Moriya, ... Nucleic acids research 41 (D1), D353-D357, 2012 | 118 | 2012 |
| DINIES: drug–target interaction network inference engine based on supervised analysis Y Yamanishi, M Kotera, Y Moriya, R Sawada, M Kanehisa, S Goto Nucleic acids research 42 (W1), W39-W45, 2014 | 107 | 2014 |
| An automated system for evaluation of the potential functionome: MAPLE version 2.1. 0 H Takami, T Taniguchi, W Arai, K Takemoto, Y Moriya, S Goto Dna Research 23 (5), 467-475, 2016 | 56 | 2016 |
| Extracting sequence motifs and the phylogenetic features of SNARE‐dependent membrane traffic AC Yoshizawa, S Kawashima, S Okuda, M Fujita, M Itoh, Y Moriya, ... Traffic 7 (8), 1104-1118, 2006 | 54 | 2006 |
| Evaluation method for the potential functionome harbored in the genome and metagenome H Takami, T Taniguchi, Y Moriya, T Kuwahara, M Kanehisa, S Goto BMC genomics 13 (1), 1-15, 2012 | 52 | 2012 |
| GENIES: gene network inference engine based on supervised analysis M Kotera, Y Yamanishi, Y Moriya, M Kanehisa, S Goto Nucleic acids research 40 (W1), W162-W167, 2012 | 42 | 2012 |
| EGENES: transcriptome-based plant database of genes with metabolic pathway information and expressed sequence tag indices in KEGG A Masoudi-Nejad, S Goto, R Jauregui, M Ito, S Kawashima, Y Moriya, ... Plant Physiology 144 (2), 857-866, 2007 | 40 | 2007 |
| MAPLE 2.3. 0: an improved system for evaluating the functionomes of genomes and metagenomes W Arai, T Taniguchi, S Goto, Y Moriya, H Uehara, K Takemoto, H Ogata, ... Bioscience, biotechnology, and biochemistry 82 (9), 1515-1517, 2018 | 39 | 2018 |
| KCF-S: KEGG Chemical Function and Substructure for improved interpretability and prediction in chemical bioinformatics M Kotera, Y Tabei, Y Yamanishi, Y Moriya, T Tokimatsu, M Kanehisa, ... BMC systems biology 7 (6), 1-17, 2013 | 31 | 2013 |
| KAAS: KEGG automatic annotation server Y Moriya, M Itoh, S Okuda, M Kanehisa Genome Informatics 5, 2005, 2005 | 24 | 2005 |
| Metabolome-scale prediction of intermediate compounds in multistep metabolic pathways with a recursive supervised approach M Kotera, Y Tabei, Y Yamanishi, A Muto, Y Moriya, T Tokimatsu, S Goto Bioinformatics 30 (12), i165-i174, 2014 | 19 | 2014 |
| KEGG and GenomeNet, new developments, metagenomic analysis M Kotera, Y Moriya, T Tokimatsu, M Kanehisa, S Goto Encyclopedia of metagenomics, 329-339, 2015 | 16 | 2015 |
| Identification of enzyme genes using chemical structure alignments of substrate–product pairs Y Moriya, T Yamada, S Okuda, Z Nakagawa, M Kotera, T Tokimatsu, ... Journal of chemical information and modeling 56 (3), 510-516, 2016 | 15 | 2016 |
| PIERO ontology for analysis of biochemical transformations: effective implementation of reaction information in the IUBMB enzyme list M Kotera, Y Nishimura, ZI Nakagawa, A Muto, Y Moriya, S Okamoto, ... Journal of bioinformatics and computational biology 12 (06), 1442001, 2014 | 11 | 2014 |
| TogoGenome/TogoStanza: modularized Semantic Web genome database T Katayama, S Kawashima, S Okamoto, Y Moriya, H Chiba, Y Naito, ... Database 2019, 2019 | 10 | 2019 |
| BioHackathon 2015: Semantics of data for life sciences and reproducible research RA Vos, T Katayama, H Mishima, S Kawano, S Kawashima, JD Kim, ... F1000Research 9, 2020 | 6 | 2020 |
| Analysis of a lipid biosynthesis protein family and phospholipid structural variations M Tanaka, Y Moriya, S Goto, M Kanehisa Genome Informatics 2009: Genome Informatics Series Vol. 22, 191-201, 2010 | 3 | 2010 |
Minoru KanehisaProfessor, Institute for Chemical Research, Kyoto UniversityVerified email at kuicr.kyoto-u.ac.jp
