| Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis JV Olsen, M Vermeulen, A Santamaria, C Kumar, ML Miller, LJ Jensen, ... Science signaling 3 (104), ra3-ra3, 2010 | 1690 | 2010 |
| Dynamic readers for 5-(hydroxy) methylcytosine and its oxidized derivatives CG Spruijt, F Gnerlich, AH Smits, T Pfaffeneder, PWTC Jansen, C Bauer, ... Cell 152 (5), 1146-1159, 2013 | 1066 | 2013 |
| Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4 M Vermeulen, KW Mulder, S Denissov, WWMP Pijnappel, ... Cell 131 (1), 58-69, 2007 | 1012 | 2007 |
| Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers M Vermeulen, HC Eberl, F Matarese, H Marks, S Denissov, F Butter, ... Cell 142 (6), 967-980, 2010 | 855 | 2010 |
| Nucleosome-interacting proteins regulated by DNA and histone methylation T Bartke, M Vermeulen, B Xhemalce, SC Robson, M Mann, T Kouzarides Cell 143 (3), 470-484, 2010 | 682 | 2010 |
| N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis RR Edupuganti, S Geiger, RGH Lindeboom, H Shi, PJ Hsu, Z Lu, ... Nature structural & molecular biology 24 (10), 870-878, 2017 | 509 | 2017 |
| Histone H2A monoubiquitination promotes histone H3 methylation in Polycomb repression R Kalb, S Latwiel, HI Baymaz, PWTC Jansen, CW Müller, M Vermeulen, ... Nature structural & molecular biology 21 (6), 569-571, 2014 | 473 | 2014 |
| Proteome-wide identification of ubiquitin interactions using UbIA-MS X Zhang, AH Smits, GBA Van Tilburg, H Ovaa, W Huber, M Vermeulen Nature protocols 13 (3), 530-550, 2018 | 469 | 2018 |
| Nuclear pore components are involved in the transcriptional regulation of dosage compensation in Drosophila S Mendjan, M Taipale, J Kind, H Holz, P Gebhardt, M Schelder, ... Molecular cell 21 (6), 811-823, 2006 | 462 | 2006 |
| Arginine methylation at histone H3R2 controls deposition of H3K4 trimethylation A Kirmizis, H Santos-Rosa, CJ Penkett, MA Singer, M Vermeulen, M Mann, ... Nature 449 (7164), 928-932, 2007 | 428 | 2007 |
| MBD2/NuRD and MBD3/NuRD, two distinct complexes with different biochemical and functional properties X Le Guezennec, M Vermeulen, AB Brinkman, WAM Hoeijmakers, ... Molecular and cellular biology 26 (3), 843-851, 2006 | 396 | 2006 |
| SMYD3 links lysine methylation of MAP3K2 to Ras-driven cancer PK Mazur, N Reynoird, P Khatri, PWTC Jansen, AW Wilkinson, S Liu, ... Nature 510 (7504), 283-287, 2014 | 395 | 2014 |
| Iodoacetamide-induced artifact mimics ubiquitination in mass spectrometry ML Nielsen, M Vermeulen, T Bonaldi, J Cox, L Moroder, M Mann Nature methods 5 (6), 459-460, 2008 | 338 | 2008 |
| Tet oxidizes thymine to 5-hydroxymethyluracil in mouse embryonic stem cell DNA T Pfaffeneder, F Spada, M Wagner, C Brandmayr, SK Laube, D Eisen, ... Nature chemical biology 10 (7), 574-581, 2014 | 325 | 2014 |
| Stoichiometry of chromatin-associated protein complexes revealed by label-free quantitative mass spectrometry-based proteomics AH Smits, PWTC Jansen, I Poser, AA Hyman, M Vermeulen Nucleic acids research 41 (1), e28-e28, 2013 | 283 | 2013 |
| Regulation of the histone H4 monomethylase PR-Set7 by CRL4Cdt2-mediated PCNA-dependent degradation during DNA damage H Oda, MR Hübner, DB Beck, M Vermeulen, J Hurwitz, DL Spector, ... Molecular cell 40 (3), 364-376, 2010 | 250 | 2010 |
| MicroRNA regulation of Cbx7 mediates a switch of Polycomb orthologs during ESC differentiation A O'Loghlen, AM Muñoz-Cabello, A Gaspar-Maia, HA Wu, A Banito, ... Cell stem cell 10 (1), 33-46, 2012 | 242 | 2012 |
| Quantitative dissection and stoichiometry determination of the human SET1/MLL histone methyltransferase complexes R van Nuland, AH Smits, P Pallaki, PWTC Jansen, M Vermeulen, ... Molecular and cellular biology, 2013 | 234 | 2013 |
| The dynamic interactome and genomic targets of Polycomb complexes during stem-cell differentiation SL Kloet, MM Makowski, HI Baymaz, L Van Voorthuijsen, ID Karemaker, ... Nature structural & molecular biology 23 (7), 682-690, 2016 | 211 | 2016 |
| A map of general and specialized chromatin readers in mouse tissues generated by label-free interaction proteomics HC Eberl, CG Spruijt, CD Kelstrup, M Vermeulen, M Mann Molecular cell 49 (2), 368-378, 2013 | 209 | 2013 |
