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Raphael Eisenhofer
Raphael Eisenhofer
Centre for Evolutionary Hologenomics, University of Copenhagen
Verified email at adelaide.edu.au - Homepage
Title
Cited by
Cited by
Year
Contamination in low microbial biomass microbiome studies: issues and recommendations
R Eisenhofer, JJ Minich, C Marotz, A Cooper, R Knight, LS Weyrich
Trends in microbiology 27 (2), 105-117, 2019
7372019
Laboratory contamination over time during low‐biomass sample analysis
LS Weyrich, AG Farrer, R Eisenhofer, LA Arriola, J Young, CA Selway, ...
Molecular ecology resources 19 (4), 982-996, 2019
1862019
An optimized method for the extraction of ancient eukaryote DNA from marine sediments
L Armbrecht, S Herrando‐Pérez, R Eisenhofer, GM Hallegraeff, ...
Molecular Ecology Resources 20 (4), 906-919, 2020
342020
Investigating the demographic history of Japan using ancient oral microbiota
R Eisenhofer, H Kanzawa-Kiriyama, K Shinoda, LS Weyrich
Philosophical Transactions of the Royal Society B 375 (1812), 20190578, 2020
292020
Microbiome applications for pathology: challenges of low microbial biomass samples during diagnostic testing
CA Selway, R Eisenhofer, LS Weyrich
The Journal of Pathology: Clinical Research 6 (2), 97-106, 2020
292020
Assessing alignment-based taxonomic classification of ancient microbial DNA
R Eisenhofer, LS Weyrich
PeerJ 7, e6594, 2019
282019
Ancient microbial DNA in dental calculus: a new method for studying rapid human migration events
R Eisenhofer, A Anderson, K Dobney, A Cooper, LS Weyrich
The Journal of Island and Coastal Archaeology 14 (2), 149-162, 2019
222019
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics
L Armbrecht, R Eisenhofer, J Utge, EC Sibert, F Rocha, R Ward, ...
ISME communications 1 (1), 66, 2021
192021
Effectiveness of decontamination protocols when analyzing ancient DNA preserved in dental calculus
AG Farrer, SL Wright, E Skelly, R Eisenhofer, K Dobney, LS Weyrich
Scientific reports 11 (1), 7456, 2021
162021
Reply to Santiago-Rodriguez et al.: proper authentication of ancient DNA is essential
R Eisenhofer, A Cooper, LS Weyrich
FEMS microbiology ecology 93 (5), fix042, 2017
162017
Signatures of landscape and captivity in the gut microbiota of Southern Hairy-nosed Wombats (Lasiorhinus latifrons)
R Eisenhofer, KM Helgen, D Taggart
Animal microbiome 3, 1-14, 2021
132021
Host reproductive cycle influences the pouch microbiota of wild southern hairy-nosed wombats (Lasiorhinus latifrons)
S Weiss, D Taggart, I Smith, K Helgen, M, R Eisenhofer
Animal Microbiome, 2021
132021
Proper authentication of ancient DNA is still essential
R Eisenhofer, LS Weyrich
Genes 9 (3), 122, 2018
132018
Impact of microbial genome completeness on metagenomic functional inference
R Eisenhofer, I Odriozola, A Alberdi
ISME communications 3 (1), 12, 2023
122023
Characterising the gut microbiomes in wild and captive short-beaked echidnas reveals diet-associated changes
T Perry, E West, R Eisenhofer, A Stenhouse, I Wilson, B Laming, ...
Frontiers in Microbiology 13, 687115, 2022
82022
Bacterial topography of the upper and lower respiratory tract in pigs
M Pirolo, C Espinosa-Gongora, A Alberdi, R Eisenhofer, M Soverini, ...
Animal Microbiome 5 (1), 5, 2023
62023
Individuality and stability of the koala (Phascolarctos cinereus) faecal microbiota through time
R Eisenhofer, KL Brice, MDJ Blyton, SE Bevins, K Leigh, BK Singh, ...
PeerJ 11, e14598, 2023
32023
Microbial biogeography of the wombat gastrointestinal tract
R Eisenhofer, E D’Agnese, D Taggart, S Carver, B Penrose
PeerJ 10, e12982, 2022
32022
Reduced metabolic capacity of the gut microbiota associates with host growth in broiler chickens
S Marcos, I Odriozola, R Eisenhofer, O Aizpurua, J Tarradas, G Martin, ...
22023
Monitoring the viable grapevine microbiome to enhance the quality of wild wines
BL Welsh, R Eisenhofer, SEP Bastian, SP Kidd
Microbiology Australia 44 (1), 13-17, 2023
22023
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Articles 1–20