Elizabeth M Batty
Elizabeth M Batty
Senior bioinformatician, Mahidol-Oxford Tropical Research Unit
Verified email at
Cited by
Cited by
Diverse sources of C. difficile infection identified on whole-genome sequencing
DW Eyre, ML Cule, DJ Wilson, D Griffiths, A Vaughan, L O'Connor, CLC Ip, ...
N Engl J Med 369, 1195-1205, 2013
Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data
N Stoesser, EM Batty, DW Eyre, M Morgan, DH Wyllie, C Del Ojo Elias, ...
Journal of Antimicrobial Chemotherapy 68 (10), 2234-2244, 2013
MinION Analysis and Reference Consortium: Phase 1 data release and analysis
CLC Ip, M Loose, JR Tyson, M de Cesare, BL Brown, M Jain, RM Leggett, ...
F1000Research 4 (1075), 2015
Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
BC Young, T Golubchik, EM Batty, R Fung, H Larner-Svensson, ...
Proceedings of the National Academy of Sciences 109 (12), 4550-4555, 2012
A pilot study of rapid benchtop sequencing of Staphylococcus aureus and Clostridium difficile for outbreak detection and surveillance
DW Eyre, T Golubchik, NC Gordon, R Bowden, P Piazza, EM Batty, ...
BMJ open 2 (3), e001124, 2012
Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131
N Stoesser, AE Sheppard, L Pankhurst, N De Maio, CE Moore, R Sebra, ...
MBio 7 (2), e02162-15, 2016
Microevolutionary analysis of Clostridium difficile genomes to investigate transmission
X Didelot, DW Eyre, M Cule, CLC Ip, MA Ansari, D Griffiths, A Vaughan, ...
Genome biology 13, 1-13, 2012
Within-host evolution of Staphylococcus aureus during asymptomatic carriage
T Golubchik, EM Batty, RR Miller, H Farr, BC Young, H Larner-Svensson, ...
PloS one 8 (5), e61319, 2013
Improved workflows for high throughput library preparation using the transposome-based Nextera system
S Lamble, E Batty, M Attar, D Buck, R Bowden, G Lunter, D Crook, ...
BMC biotechnology 13 (1), 1-10, 2013
Genome sequencing of an extended series of NDM-producing Klebsiella pneumoniae isolates from neonatal infections in a Nepali hospital characterizes the extent of community …
N Stoesser, A Giess, EM Batty, AE Sheppard, AS Walker, DJ Wilson, ...
Antimicrobial agents and chemotherapy 58 (12), 7347-7357, 2014
Mobile elements drive recombination hotspots in the core genome of Staphylococcus aureus
RG Everitt, X Didelot, EM Batty, RR Miller, K Knox, BC Young, R Bowden, ...
Nature communications 5 (1), 3956, 2014
Recombinational Switching of the Clostridium difficile S-Layer and a Novel Glycosylation Gene Cluster Revealed by Large-Scale Whole-Genome Sequencing
KE Dingle, X Didelot, MA Ansari, DW Eyre, A Vaughan, D Griffiths, CLC Ip, ...
The Journal of infectious diseases 207 (4), 675-686, 2013
Structural analysis of the genome of breast cancer cell line ZR-75-30 identifies twelve expressed fusion genes
I Schulte, EM Batty, J Pole, KA Blood, S Mo, SL Cooke, C Ng, KL Howe, ...
BMC genomics 13 (1), 1-11, 2012
The role of tandem duplicator phenotype in tumour evolution in high‐grade serous ovarian cancer
CKY Ng, SL Cooke, K Howe, S Newman, J Xian, J Temple, EM Batty, ...
The Journal of pathology 226 (5), 703-712, 2012
A modified RNA-Seq approach for whole genome sequencing of RNA viruses from faecal and blood samples
EM Batty, THN Wong, A Trebes, K Argoud, M Attar, D Buck, CLC Ip, ...
PloS one 8 (6), e66129, 2013
Modernizing Medical Microbiology Informatics Group (MMMIG). 2016. Evolutionary history of the global emergence of the Escherichia coli epidemic clone ST131. mBio 7: e02162
N Stoesser, AE Sheppard, L Pankhurst, N De Maio, CE Moore, R Sebra, ...
MBio 7, e02162, 0
Large duplications at reciprocal translocation breakpoints that might be the counterpart of large deletions and could arise from stalled replication bubbles
KD Howarth, JCM Pole, JC Beavis, EM Batty, S Newman, GR Bignell, ...
Genome research 21 (4), 525-534, 2011
Healthcare-associated outbreak of meticillin-resistant Staphylococcus aureus bacteraemia: role of a cryptic variant of an epidemic clone
RR Miller, JR Price, EM Batty, X Didelot, D Wyllie, T Golubchik, DW Crook, ...
Journal of Hospital Infection 86 (2), 83-89, 2014
Long-read whole genome sequencing and comparative analysis of six strains of the human pathogen Orientia tsutsugamushi
EM Batty, S Chaemchuen, S Blacksell, AL Richards, D Paris, R Bowden, ...
PLoS neglected tropical diseases 12 (6), e0006566, 2018
Genomic surveillance of SARS-CoV-2 in Thailand reveals mixed imported populations, a local lineage expansion and a virus with truncated ORF7a
K Joonlasak, EM Batty, T Kochakarn, B Panthan, K Kümpornsin, ...
Virus Research 292, 198233, 2021
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