Looking in the rear-view mirror: bias and retrospective patterns in integrated, age-structured stock assessment models F Hurtado-Ferro, CS Szuwalski, JL Valero, SC Anderson, CJ Cunningham, ... ICES Journal of Marine Science 72 (1), 99-110, 2015 | 198 | 2015 |
Time-varying natural mortality in fisheries stock assessment models: identifying a default approach KF Johnson, CC Monnahan, CR McGilliard, KA Vert-Pre, SC Anderson, ... ICES Journal of Marine Science 72 (1), 137-150, 2015 | 128 | 2015 |
A cookbook for using model diagnostics in integrated stock assessments F Carvalho, H Winker, D Courtney, M Kapur, L Kell, M Cardinale, ... Fisheries Research 240, 105959, 2021 | 92 | 2021 |
Model-based estimates of effective sample size in stock assessment models using the Dirichlet-multinomial distribution JT Thorson, KF Johnson, RD Methot, IG Taylor Fisheries Research 192, 84-93, 2017 | 84 | 2017 |
Exploring the implications of the harvest control rule for Pacific sardine, accounting for predator dynamics: A MICE model AE Punt, AD MacCall, TE Essington, TB Francis, F Hurtado-Ferro, ... Ecological Modelling 337, 79-95, 2016 | 81 | 2016 |
The importance of length and age composition data in statistical age-structured models for marine species K Ono, R Licandeo, ML Muradian, CJ Cunningham, SC Anderson, ... ICES Journal of Marine Science 72 (1), 31-43, 2015 | 81 | 2015 |
Unraveling the recruitment problem: a review of environmentally-informed forecasting and management strategy evaluation MA Haltuch, EN Brooks, J Brodziak, JA Devine, KF Johnson, N Klibansky, ... Fisheries Research 217, 198-216, 2019 | 77 | 2019 |
Ocean futures under ocean acidification, marine protection, and changing fishing pressures explored using a worldwide suite of ecosystem models E Olsen, IC Kaplan, C Ainsworth, G Fay, S Gaichas, R Gamble, R Girardin, ... Frontiers in Marine Science 5, 64, 2018 | 61 | 2018 |
A multi-model approach to understanding the role of Pacific sardine in the California Current food web IC Kaplan, TB Francis, AE Punt, LE Koehn, E Curchitser, F Hurtado-Ferro, ... Marine Ecology Progress Series 617, 307-321, 2019 | 45 | 2019 |
Can autocorrelated recruitment be estimated using integrated assessment models and how does it affect population forecasts? KF Johnson, E Councill, JT Thorson, E Brooks, RD Methot, AE Punt Fisheries Research 183, 222-232, 2016 | 43 | 2016 |
ss3sim: an R package for fisheries stock assessment simulation with Stock Synthesis SC Anderson, CC Monnahan, KF Johnson, K Ono, JL Valero PLoS One 9 (4), e92725, 2014 | 42 | 2014 |
Considerations for management strategy evaluation for small pelagic fishes MC Siple, LE Koehn, KF Johnson, AE Punt, TM Canales, P Carpi, ... Fish and Fisheries 22 (6), 1167-1186, 2021 | 35 | 2021 |
Operationalizing ensemble models for scientific advice to fisheries management E Jardim, M Azevedo, J Brodziak, EN Brooks, KF Johnson, N Klibansky, ... ICES Journal of Marine Science 78 (4), 1209-1216, 2021 | 31 | 2021 |
Beyond visualizing catch-at-age models: Lessons learned from the r4ss package about software to support stock assessments IG Taylor, KL Doering, KF Johnson, CR Wetzel, IJ Stewart Fisheries Research 239, 105924, 2021 | 29 | 2021 |
Status of the US sablefish resource in 2015 KF Johnson, MB Rudd, M Pons, CA Akselrud, Q Lee, F Hurtado-Ferro, ... Pacific Fisheries Management Council, Portland, OR, 2016 | 28 | 2016 |
Status of the Pacific Hake (whiting) stock in US and Canadian waters in 2022 A Berger, A Edwards, C Grandin, K Johnson | 27 | 2022 |
How does growth misspecification affect management advice derived from an integrated fisheries stock assessment model? CC Stawitz, MA Haltuch, KF Johnson Fisheries Research 213, 12-21, 2019 | 23 | 2019 |
An empirical weight-at-age approach reduces estimation bias compared to modeling parametric growth in integrated, statistical stock assessment models when growth is time varying PT Kuriyama, K Ono, F Hurtado-Ferro, AC Hicks, IG Taylor, RR Licandeo, ... Fisheries Research 180, 119-127, 2016 | 21 | 2016 |
Status of Pacific ocean perch (Sebastes alutus) along the US west coast in 2017 CR Wetzel, L Cronin-Fine, KF Johnson Pacific Fishery Management Council 7700, 97220, 2017 | 20 | 2017 |
The effect of length bin width on growth estimation in integrated age-structured stock assessments CC Monnahan, K Ono, SC Anderson, MB Rudd, AC Hicks, ... Fisheries Research 180, 103-112, 2016 | 20 | 2016 |