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Fabini Orata
Fabini Orata
Department of Chemical and Materials Engineering, University of Alberta
Bekræftet mail på ualberta.ca - Startside
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Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti
LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ...
mBio 4 (4), e00398-13, 2013
138*2013
The 2010 cholera outbreak in Haiti: how science solved a controversy
FD Orata, PS Keim, Y Boucher
PLoS Pathogens 10 (4), e1003967, 2014
1212014
Phylogenomic analysis of the gammaproteobacterial methanotrophs (order Methylococcales) calls for the reclassification of members at the genus and species levels
FD Orata, JP Meier-Kolthoff, D Sauvageau, LY Stein
Frontiers in Microbiology 9, 3162, 2018
912018
A genomic island in Vibrio cholerae with VPI-1 site-specific recombination characteristics contains CRISPR-Cas and type VI secretion modules
M Labbate, FD Orata, NK Petty, ND Jayatilleke, WL King, PC Kirchberger, ...
Scientific Reports 6, 36891, 2016
36*2016
The dynamics of genetic interactions between Vibrio metoecus and Vibrio cholerae, two close relatives co-occurring in the environment
FD Orata, PC Kirchberger, R Méheust, EJ Barlow, CL Tarr, Y Boucher
Genome Biology and Evolution 7 (10), 2941-2954, 2015
362015
A small number of phylogenetically distinct clonal complexes dominate a coastal Vibrio cholerae population
PC Kirchberger, FD Orata, EJ Barlow, KM Kauffman, RJ Case, MF Polz, ...
Applied and Environmental Microbiology 82 (18), 5576-5586, 2016
352016
The out-of-the-delta hypothesis: dense human populations in low-lying river deltas served as agents for the evolution of a deadly pathogen
Y Boucher, FD Orata, M Alam
Frontiers in Microbiology 6, 1120, 2015
312015
Roseobacters in a sea of poly- and paraphyly: whole genome-based taxonomy of the family Rhodobacteraceae and the proposal for the split of the “roseobacter clade” into a novel …
KYH Liang, FD Orata, YF Boucher, RJ Case
Frontiers in Microbiology 12, 683109, 2021
292021
Characterization of clinical and environmental isolates of Vibrio cidicii sp. nov., a close relative of Vibrio navarrensis
FD Orata, Y Xu, LM Gladney, L Rishishwar, RJ Case, Y Boucher, ...
International Journal of Systematic and Evolutionary Microbiology 66 (10 …, 2016
182016
The bacterial symbiont Phaeobacter inhibens shapes the life history of its algal host Emiliania huxleyi
AR Bramucci, L Labeeuw, FD Orata, EM Ryan, RR Malmstrom, RJ Case
Frontiers in Marine Science 5, 188, 2018
152018
Culture‐independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population
PC Kirchberger, FD Orata, T Nasreen, KM Kauffman, CL Tarr, RJ Case, ...
Environmental Microbiology 22 (10), 4244-4256, 2020
142020
Complete genome sequence of Methylomonas denitrificans strain FJG1, an obligate aerobic methanotroph that can couple methane oxidation with denitrification
FD Orata, KD Kits, LY Stein
Genome Announcements 6 (17), e00276-18, 2018
142018
Bacillus amyloliquefaciens ssp. plantarum F11 isolated from Algerian salty lake as a source of biosurfactants and bioactive lipopeptides
MS Daas, JZ Acedo, ARR Rosana, FD Orata, B Reiz, J Zheng, F Nateche, ...
FEMS Microbiology Letters 365 (1), fnx248, 2017
14*2017
Draft genome sequences of seven bacterial strains isolated from a polymicrobial culture of coccolith-bearing (C-type) Emiliania huxleyi M217
ARR Rosana, FD Orata, Y Xu, DN Simkus, AR Bramucci, Y Boucher, ...
Genome Announcements 4 (4), e00673-16, 2016
132016
Simultaneous quantification of Vibrio metoecus and Vibrio cholerae with its O1 serogroup and toxigenic subpopulations in environmental reservoirs
T Nasreen, NAS Hussain, MT Islam, FD Orata, PC Kirchberger, RJ Case, ...
Pathogens 9 (12), 1053, 2020
9*2020
A Vibrio cholerae core genome multilocus sequence typing scheme to facilitate the epidemiological study of cholera
KYH Liang, FD Orata, MT Islam, T Nasreen, M Alam, CL Tarr, YF Boucher
Journal of Bacteriology 202 (24), e00086-20, 2020
92020
Isolation and sequence analysis of the full-length toxR gene of type strain Vibrio campbellii and use of the toxR gene sequence to evaluate variation and relatedness with other …
FD Orata, CT Hedreyda
Philippine Science Letters 4 (1), 70-80, 2011
92011
Population analysis of Vibrio cholerae in aquatic reservoirs reveals a novel sister species (Vibrio paracholerae sp. nov.) with a history of association with humans
MT Islam, T Nasreen, P Kirchberger, KYH Liang, FD Orata, FT Johura, ...
Applied and Environmental Microbiology 87 (17), e00422-21, 2021
72021
Complete genome sequence of Vibrio sp. strain 2521-89, a close relative of Vibrio cholerae isolated from lake water in New Mexico, USA
K Liang, FD Orata, NS Winkjer, LA Rowe, CL Tarr, Y Boucher
Genome Announcements 5 (35), e00905-17, 2017
62017
Draft genome sequences of four bacterial strains isolated from a polymicrobial culture of naked (N-type) Emiliania huxleyi CCMP1516
FD Orata, ARR Rosana, Y Xu, DN Simkus, AR Bramucci, Y Boucher, ...
Genome Announcements 4 (4), e00674-16, 2016
52016
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