| PhenoMeNal: processing and analysis of metabolomics data in the cloud K Peters, J Bradbury, S Bergmann, M Capuccini, M Cascante, P de Atauri, ... GigaScience 8 (2), giy149, 2019 | 75 | 2019 |
| Container-based bioinformatics with Pachyderm JA Novella, P Emami Khoonsari, S Herman, D Whitenack, M Capuccini, ... Bioinformatics 35 (5), 839-846, 2019 | 67 | 2019 |
| Estimating diagnostic uncertainty in artificial intelligence assisted pathology using conformal prediction H Olsson, K Kartasalo, N Mulliqi, M Capuccini, P Ruusuvuori, ... Nature communications 13 (1), 7761, 2022 | 51 | 2022 |
| Efficient iterative virtual screening with Apache Spark and conformal prediction L Ahmed, V Georgiev, M Capuccini, S Toor, W Schaal, E Laure, O Spjuth Journal of cheminformatics 10, 1-8, 2018 | 49 | 2018 |
| Interoperable and scalable data analysis with microservices: applications in metabolomics P Emami Khoonsari, P Moreno, S Bergmann, J Burman, M Capuccini, ... Bioinformatics 35 (19), 3752-3760, 2019 | 33 | 2019 |
| SNIC Science Cloud (SSC): a national-scale cloud infrastructure for Swedish academia S Toor, M Lindberg, I Falman, A Vallin, O Mohill, P Freyhult, L Nilsson, ... 2017 IEEE 13th international conference on e-science (e-Science), 219-227, 2017 | 31 | 2017 |
| Large-scale virtual screening on public cloud resources with Apache Spark M Capuccini, L Ahmed, W Schaal, E Laure, O Spjuth Journal of Cheminformatics 9, 1-6, 2017 | 28 | 2017 |
| On-demand virtual research environments using microservices M Capuccini, A Larsson, M Carone, JA Novella, N Sadawi, J Gao, S Toor, ... PeerJ Computer Science 5, e232, 2019 | 22* | 2019 |
| Conformal prediction in spark: Large-scale machine learning with confidence M Capuccini, L Carlsson, U Norinder, O Spjuth 2015 IEEE/ACM 2nd International Symposium on Big Data Computing (BDC), 61-67, 2015 | 10 | 2015 |
| Approaches for containerized scientific workflows in cloud environments with applications in life science O Spjuth, M Capuccini, M Carone, A Larsson, W Schaal, JA Novella, ... F1000Research 10 (513), 513, 2021 | 8 | 2021 |
| MaRe: processing big data with application containers on apache spark M Capuccini, M Dahlö, S Toor, O Spjuth GigaScience 9 (5), giaa042, 2020 | 4 | 2020 |
| Metabolomics in the cloud: scaling computational tools to big data J Gao, N Sadawi, I Karaman, J Pearce, P Moreno, A Larsson, ... arXiv preprint arXiv:1904.02288, 2019 | 1 | 2019 |
| Enabling Scalable Data Analysis on Cloud Resources with Applications in Life Science M Capuccini Acta Universitatis Upsaliensis, 2019 | 1 | 2019 |
Ola SpjuthProfessor at Department of Pharmaceutical Biosciences, Uppsala UniversityVerified email at farmbio.uu.se
