| Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA R Vaisvila, VKC Ponnaluri, Z Sun, BW Langhorst, L Saleh, S Guan, N Dai, ... Genome research 31 (7), 1280-1289, 2021 | 200 | 2021 |
| A mechanistic overview of TET-mediated 5-methylcytosine oxidation VKC Ponnaluri, JP Maciejewski, M Mukherji Biochemical and biophysical research communications 436 (2), 115-120, 2013 | 76 | 2013 |
| Identification of non-histone substrates for JMJD2A–C histone demethylases VKC Ponnaluri, DT Vavilala, S Putty, WG Gutheil, M Mukherji Biochemical and biophysical research communications 390 (2), 280-284, 2009 | 73 | 2009 |
| Association of 5-hydroxymethylation and 5-methylation of DNA cytosine with tissue-specific gene expression VKC Ponnaluri, KC Ehrlich, G Zhang, M Lacey, D Johnston, S Pradhan, ... Epigenetics 12 (2), 123-138, 2017 | 69 | 2017 |
| NicE-seq: high resolution open chromatin profiling VKC Ponnaluri, G Zhang, PO Estève, G Spracklin, S Sian, S Xu, ... Genome biology 18, 1-15, 2017 | 48 | 2017 |
| S-adenosylhomocysteine hydrolase participates in DNA methylation inheritance VKC Ponnaluri, PO Estève, CI Ruse, S Pradhan Journal of molecular biology 430 (14), 2051-2065, 2018 | 47 | 2018 |
| EM-seq: detection of DNA methylation at single base resolution from picograms of DNA R Vaisvila, VKC Ponnaluri, Z Sun, BW Langhorst, L Saleh, S Guan, N Dai, ... BioRxiv, 2019.12. 20.884692, 2019 | 41 | 2019 |
| Developmentally linked human DNA hypermethylation is associated with down-modulation, repression, and upregulation of transcription C Baribault, KC Ehrlich, VKC Ponnaluri, S Pradhan, M Lacey, M Ehrlich Epigenetics 13 (3), 275-289, 2018 | 38 | 2018 |
| Levels of DNA cytosine methylation in the Drosophila genome S Deshmukh, VKC Ponnaluri, N Dai, S Pradhan, D Deobagkar PeerJ 6, e5119, 2018 | 33 | 2018 |
| Honokiol inhibits HIF pathway and hypoxia-induced expression of histone lysine demethylases DT Vavilala, VKC Ponnaluri, RK Vadlapatla, D Pal, AK Mitra, M Mukherji Biochemical and biophysical research communications 422 (3), 369-374, 2012 | 32 | 2012 |
| Hypoxia induced expression of histone lysine demethylases: implications in oxygen-dependent retinal neovascular diseases VKC Ponnaluri, RK Vadlapatla, DT Vavilala, D Pal, AK Mitra, M Mukherji Biochemical and biophysical research communications 415 (2), 373-377, 2011 | 30 | 2011 |
| Evaluation of anti-HIF and anti-angiogenic properties of honokiol for the treatment of ocular neovascular diseases DT Vavilala, VKC Ponnaluri, D Kanjilal, M Mukherji PLoS One 9 (11), e113717, 2014 | 29 | 2014 |
| The SEQC2 epigenomics quality control (EpiQC) study J Foox, J Nordlund, C Lalancette, T Gong, M Lacey, S Lent, BW Langhorst, ... Genome biology 22, 1-30, 2021 | 24 | 2021 |
| Honokiol inhibits pathological retinal neovascularization in oxygen-induced retinopathy mouse model DT Vavilala, BE O’Bryhim, VKC Ponnaluri, RS White, J Radel, ... Biochemical and Biophysical Research Communications 438 (4), 697-702, 2013 | 24 | 2013 |
| Transcription factor LSF-DNMT1 complex dissociation by FQI1 leads to aberrant DNA methylation and gene expression HG Chin, VC Ponnaluri, G Zhang, PO Esteve, SE Schaus, U Hansen, ... Oncotarget 7 (50), 83627, 2016 | 23 | 2016 |
| Molecular expression and functional activity of efflux and influx transporters in hypoxia induced retinal pigment epithelial cells RK Vadlapatla, AD Vadlapudi, VKC Ponnaluri, D Pal, M Mukherji, ... International journal of pharmaceutics 454 (1), 444-452, 2013 | 22 | 2013 |
| Microtiter plate-based assay for inhibitors of penicillin-binding protein 2a from methicillin-resistant Staphylococcus aureus S Bobba, VKC Ponnaluri, M Mukherji, WG Gutheil Antimicrobial agents and chemotherapy 55 (6), 2783-2787, 2011 | 22 | 2011 |
| Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression XCSP Pierre-Olivier Estève1, Guoqiang Zhang, V.K. Chaithanya Ponnaluri ... Nucleic Acid Research, 2015 | 16* | 2015 |
| Enzymatic methyl-seq: next generation methylomes A Hoppers, L Williams, VKC Ponnaluri, B Sexton, L Saleh, M Campbell, ... Journal of Biomolecular Techniques: JBT 31 (Suppl), S15, 2020 | 14 | 2020 |
| Hypoxia mediated expression of stem cell markers in VHL-associated hemangioblastomas VKC Ponnaluri, DT Vavilala, S Prakash, M Mukherji Biochemical and Biophysical Research Communications 438 (1), 71-77, 2013 | 13 | 2013 |
