| Advances in de novo drug design: from conventional to machine learning methods VD Mouchlis, A Afantitis, A Serra, M Fratello, AG Papadiamantis, V Aidinis, ... International journal of molecular sciences 22 (4), 1676, 2021 | 245 | 2021 |
| Decision trees and random forests M Fratello, R Tagliaferri Encyclopedia of bioinformatics and computational biology: ABC of …, 2018 | 113 | 2018 |
| MVDA: a multi-view genomic data integration methodology A Serra, M Fratello, V Fortino, G Raiconi, R Tagliaferri, D Greco BMC bioinformatics 16, 1-13, 2015 | 89 | 2015 |
| Transcriptomics in toxicogenomics, part I: experimental design, technologies, publicly available data, and regulatory aspects PAS Kinaret, A Serra, A Federico, P Kohonen, P Nymark, I Liampa, MK Ha, ... Nanomaterials 10 (4), 750, 2020 | 56 | 2020 |
| Functional interictal changes of pain processing in migraine with ictal cutaneous allodynia A Russo, F Esposito, F Conte, M Fratello, G Caiazzo, L Marcuccio, ... Cephalalgia 37 (4), 305-314, 2017 | 55 | 2017 |
| Transcriptomics in toxicogenomics, part III: data modelling for risk assessment A Serra, M Fratello, L Cattelani, I Liampa, G Melagraki, P Kohonen, ... Nanomaterials 10 (4), 708, 2020 | 52 | 2020 |
| Resting state fMRI correlates of Theory of Mind impairment in amyotrophic lateral sclerosis F Trojsi, F Di Nardo, G Santangelo, M Siciliano, C Femiano, C Passaniti, ... Cortex 97, 1-16, 2017 | 50 | 2017 |
| Multi-view ensemble classification of brain connectivity images for neurodegeneration type discrimination M Fratello, G Caiazzo, F Trojsi, A Russo, G Tedeschi, R Tagliaferri, ... Neuroinformatics 15, 199-213, 2017 | 45 | 2017 |
| Transcriptomics in toxicogenomics, part II: preprocessing and differential expression analysis for high quality data A Federico, A Serra, MK Ha, P Kohonen, JS Choi, I Liampa, P Nymark, ... Nanomaterials 10 (5), 903, 2020 | 44 | 2020 |
| BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data A Serra, LA Saarimäki, M Fratello, VS Marwah, D Greco Bioinformatics 36 (9), 2932-2933, 2020 | 27 | 2020 |
| Robust and sparse correlation matrix estimation for the analysis of high-dimensional genomics data A Serra, P Coretto, M Fratello, R Tagliaferri Bioinformatics 34 (4), 625-634, 2018 | 27 | 2018 |
| Biomarkers of nanomaterials hazard from multi-layer data V Fortino, PAS Kinaret, M Fratello, A Serra, LA Saarimäki, A Gallud, ... Nature Communications 13 (1), 3798, 2022 | 24 | 2022 |
| Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation A Serra, M Fratello, A Federico, R Ojha, R Provenzani, E Tasnadi, ... Briefings in bioinformatics 23 (1), bbab507, 2022 | 21 | 2022 |
| TinderMIX: Time-dose integrated modelling of toxicogenomics data A Serra, M Fratello, G Del Giudice, LA Saarimäki, M Paci, A Federico, ... Gigascience 9 (5), giaa055, 2020 | 19 | 2020 |
| An ancestral molecular response to nanomaterial particulates G Del Giudice, A Serra, LA Saarimäki, K Kotsis, I Rouse, SA Colibaba, ... Nature Nanotechnology 18 (8), 957-966, 2023 | 17 | 2023 |
| Integrated network pharmacology approach for drug combination discovery: a multi-cancer case study A Federico, M Fratello, G Scala, L Möbus, A Pavel, G Del Giudice, ... Cancers 14 (8), 2043, 2022 | 17 | 2022 |
| Toxicogenomics Data for Chemical Safety Assessment and Development of New Approach Methodologies: An Adverse Outcome Pathway‐Based Approach LA Saarimäki, J Morikka, A Pavel, S Korpilähde, G Del Giudice, ... Advanced Science 10 (2), 2203984, 2023 | 16 | 2023 |
| Central pain processing in “drug‐naïve” pain‐free patients with Parkinson's disease A Tessitore, A Russo, R De Micco, M Fratello, G Caiazzo, A Giordano, ... Human brain mapping 39 (2), 932-940, 2018 | 16 | 2018 |
| A low-cost open-architecture taste delivery system for gustatory fMRI and BCI experiments A Canna, A Prinster, M Fratello, L Puglia, M Magliulo, E Cantone, ... Journal of Neuroscience Methods 311, 1-12, 2019 | 15 | 2019 |
| Encyclopedia of bioinformatics and computational biology: ABC of bioinformatics M Fratello, R Tagliaferri, S Ranganathan, K Nakai, C Schönbach, ... Decision Trees and Random Forest 1, 374-384, 2018 | 15 | 2018 |
Angela SerraTampere University, Institute of Biomedical TechnologyVerified email at tuni.fi
