Sonja Lehtinen
Sonja Lehtinen
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Cited by
CATH: comprehensive structural and functional annotations for genome sequences
I Sillitoe, TE Lewis, A Cuff, S Das, P Ashford, NL Dawson, N Furnham, ...
Nucleic acids research 43 (D1), D376-D381, 2015
Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage
S Lehtinen, F Blanquart, NJ Croucher, P Turner, M Lipsitch, C Fraser
Proceedings of the National Academy of Sciences 114 (5), 1075-1080, 2017
Gene3D: expanding the utility of domain assignments
SD Lam, NL Dawson, S Das, I Sillitoe, P Ashford, D Lee, S Lehtinen, ...
Nucleic acids research 44 (D1), D404-D409, 2016
COVID-19 infectivity profile correction
A Peter, JS Huisman, L Sonja, JA Bouman, CL Althaus, RR Regoes, ...
Swiss Medical Weekly 150, 2020
On the evolutionary ecology of multidrug resistance in bacteria
S Lehtinen, F Blanquart, M Lipsitch, C Fraser, ...
PLoS pathogens 15 (5), e1007763, 2019
The evolution of antibiotic resistance in a structured host population
F Blanquart, S Lehtinen, M Lipsitch, C Fraser
Journal of The Royal Society Interface 15 (143), 20180040, 2018
Stress induces remodelling of yeast interaction and co-expression networks
S Lehtinen, FX Marsellach, S Codlin, A Schmidt, M Clément-Ziza, A Beyer, ...
Molecular biosystems 9 (7), 1697-1707, 2013
An evolutionary model to predict the frequency of antibiotic resistance under seasonal antibiotic use, and an application to Streptococcus pneumoniae
F Blanquart, S Lehtinen, C Fraser
Proceedings of the Royal Society B: Biological Sciences 284 (1855), 20170679, 2017
Gene function prediction from functional association networks using kernel partial least squares regression
S Lehtinen, J Lees, J Bähler, J Shawe-Taylor, C Orengo
PloS one 10 (8), e0134668, 2015
Mathematical modelling for antibiotic resistance control policy: do we know enough?
GM Knight, NG Davies, C Colijn, F Coll, T Donker, DR Gifford, RE Glover, ...
BMC infectious diseases 19 (1), 1-9, 2019
Quantifying the impact of quarantine duration on COVID-19 transmission
P Ashcroft, S Lehtinen, DC Angst, N Low, S Bonhoeffer
Elife 10, e63704, 2021
Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae
S Lehtinen, C Chewapreecha, J Lees, WP Hanage, M Lipsitch, ...
Science advances 6 (21), eaaz6137, 2020
On the relationship between serial interval, infectiousness profile and generation time
S Lehtinen, P Ashcroft, S Bonhoeffer
Journal of the Royal Society Interface 18 (174), 20200756, 2021
Co-Expression Network Models Suggest that Stress Increases Tolerance to Mutations
S Lehtinen, J Bähler, C Orengo
Scientific reports 5 (1), 1-8, 2015
Factors favouring the evolution of multidrug resistance in bacteria
E Jacopin, S Lehtinen, F Débarre, F Blanquart
Journal of the Royal Society Interface 17 (168), 20200105, 2020
Estimating the effects of non-pharmaceutical interventions on the number of new infections with COVID-19 during the first epidemic wave
N Banholzer, E van Weenen, A Lison, A Cenedese, A Seeliger, ...
medRxiv, 2021
Evolutionary mechanisms that determine which bacterial genes are carried on plasmids
S Lehtinen, JS Huisman, S Bonhoeffer
bioRxiv, 2020
Epidemiological dynamics of bacteriocin competition and antibiotic resistance
S Lehtinen, NJ Croucher, F Blanquart, C Fraser
bioRxiv, 2020
Co-colonisation and coexistence
S Lehtinen
Nature ecology & evolution 3 (3), 334-335, 2019
Gene and Protein Networks in Understanding Cellular Function
SK Lehtinen
UCL (University College London), 2015
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