Zhenqing Ye
Zhenqing Ye
Assistant Professor/Research, Greehey Children's Cancer Research Institute
Verified email at uthscsa.edu
Title
Cited by
Cited by
Year
Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages
X Lan, H Witt, K Katsumura, Z Ye, Q Wang, EH Bresnick, PJ Farnham, ...
Nucleic acids research 40 (16), 7690-7704, 2012
2012012
On the origin of Tibetans and their genetic basis in adapting high-altitude environments
B Wang, YB Zhang, F Zhang, H Lin, X Wang, N Wan, Z Ye, H Weng, ...
PloS one 6 (2), e17002, 2011
1572011
Intrinsic BET inhibitor resistance in SPOP-mutated prostate cancer is mediated by BET protein stabilization and AKT–mTORC1 activation
P Zhang, D Wang, Y Zhao, S Ren, K Gao, Z Ye, S Wang, CW Pan, Y Zhu, ...
Nature medicine 23 (9), 1055-1062, 2017
1472017
MicroRNA-224 promotes tumor progression in nonsmall cell lung cancer
R Cui, W Meng, HL Sun, T Kim, Z Ye, M Fassan, YJ Jeon, B Li, C Vicentini, ...
Proceedings of the National Academy of Sciences 112 (31), E4288-E4297, 2015
1272015
Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3
S Frietze, R Wang, L Yao, YG Tak, Z Ye, M Gaddis, H Witt, PJ Farnham, ...
Genome biology 13 (9), 1-18, 2012
1092012
MicroRNA-31 predicts the presence of lymph node metastases and survival in patients with lung adenocarcinoma
W Meng, Z Ye, R Cui, J Perry, V Dedousi-Huebner, A Huebner, Y Wang, ...
Clinical cancer research 19 (19), 5423-5433, 2013
1012013
Three-tiered role of the pioneer factor GATA2 in promoting androgen-dependent gene expression in prostate cancer
D Wu, B Sunkel, Z Chen, X Liu, Z Ye, Q Li, C Grenade, J Ke, C Zhang, ...
Nucleic acids research 42 (6), 3607-3622, 2014
952014
Phosphorylated RB promotes cancer immunity by inhibiting NF-κB activation and PD-L1 expression
X Jin, D Ding, Y Yan, H Li, B Wang, L Ma, Z Ye, T Ma, Q Wu, ...
Molecular cell 73 (1), 22-35. e6, 2019
802019
Adaptive clustering algorithm for community detection in complex networks
Z Ye, S Hu, J Yu
physical review E 78 (4), 046115, 2008
762008
Ligand-dependent genomic function of glucocorticoid receptor in triple-negative breast cancer
Z Chen, X Lan, D Wu, B Sunkel, Z Ye, J Huang, Z Liu, SK Clinton, VX Jin, ...
Nature communications 6 (1), 1-8, 2015
642015
ZBTB33 binds unmethylated regions of the genome associated with actively expressed genes
A Blattler, L Yao, Y Wang, Z Ye, VX Jin, PJ Farnham
Epigenetics & chromatin 6 (1), 1-18, 2013
642013
The transcription factor Bhlhe40 programs mitochondrial regulation of resident CD8+ T cell fitness and functionality
C Li, B Zhu, YM Son, Z Wang, L Jiang, M Xiang, Z Ye, KE Beckermann, ...
Immunity 51 (3), 491-507. e7, 2019
632019
DUB3 promotes BET inhibitor resistance and cancer progression by deubiquitinating BRD4
X Jin, Y Yan, D Wang, D Ding, T Ma, Z Ye, R Jimenez, L Wang, H Wu, ...
Molecular cell 71 (4), 592-605. e4, 2018
592018
Agonist and antagonist switch DNA motifs recognized by human androgen receptor in prostate cancer
Z Chen, X Lan, JM Thomas‐Ahner, D Wu, X Liu, Z Ye, L Wang, B Sunkel, ...
The EMBO journal 34 (4), 502-516, 2015
582015
Androgen receptor splice variants bind to constitutively open chromatin and promote abiraterone-resistant growth of prostate cancer
Y He, J Lu, Z Ye, S Hao, L Wang, M Kohli, DJ Tindall, B Li, R Zhu, L Wang, ...
Nucleic acids research 46 (4), 1895-1911, 2018
492018
Genome-wide DNA methylation analysis reveals estrogen-mediated epigenetic repression of metallothionein-1 gene cluster in breast cancer
RR Jadhav, Z Ye, RL Huang, J Liu, PY Hsu, YW Huang, LB Rangel, ...
Clinical epigenetics 7 (1), 1-15, 2015
482015
PD-1hi CD8+ resident memory T cells balance immunity and fibrotic sequelae
Z Wang, S Wang, NP Goplen, C Li, IS Cheon, Q Dai, S Huang, J Shan, ...
Science immunology 4 (36), 2019
392019
A prospective genome-wide study of prostate cancer metastases reveals association of wnt pathway activation and increased cell cycle proliferation with primary resistance to …
L Wang, SM Dehm, DW Hillman, H Sicotte, W Tan, M Gormley, ...
Annals of Oncology 29 (2), 352-360, 2018
372018
EZH 2 cooperates with gain‐of‐function p53 mutants to promote cancer growth and metastasis
Y Zhao, L Ding, D Wang, Z Ye, Y He, L Ma, R Zhu, Y Pan, Q Wu, K Pang, ...
The EMBO journal 38 (5), e99599, 2019
282019
Integrative analysis identifies targetable CREB1/FoxA1 transcriptional co-regulation as a predictor of prostate cancer recurrence
B Sunkel, D Wu, Z Chen, CM Wang, X Liu, Z Ye, AM Horning, J Liu, ...
Nucleic acids research 44 (9), 4105-4122, 2016
272016
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